Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 MIR3180-4-201ENST00000582223 153 ntBASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00588Q9Y4M8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00588Q9Y4M8 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC00588Q9Y4M8 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC12.71□□□□□ -0.37
LINC00588Q9Y4M8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00588Q9Y4M8 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00588Q9Y4M8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00588Q9Y4M8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00588Q9Y4M8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00588Q9Y4M8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC12.71□□□□□ -0.37
LINC00588Q9Y4M8 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00588Q9Y4M8 CNP-204ENST00000472031 1019 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC00588Q9Y4M8 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00588Q9Y4M8 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
LINC00588Q9Y4M8 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC12.71□□□□□ -0.37
LINC00588Q9Y4M8 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC12.71□□□□□ -0.37
LINC00588Q9Y4M8 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
LINC00588Q9Y4M8 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC12.71□□□□□ -0.37
LINC00588Q9Y4M8 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00588Q9Y4M8 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC12.71□□□□□ -0.37
LINC00588Q9Y4M8 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
LINC00588Q9Y4M8 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00588Q9Y4M8 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00588Q9Y4M8 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
LINC00588Q9Y4M8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00588Q9Y4M8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00588Q9Y4M8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00588Q9Y4M8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC12.71□□□□□ -0.38
LINC00588Q9Y4M8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC12.71□□□□□ -0.38
LINC00588Q9Y4M8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00588Q9Y4M8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC12.71□□□□□ -0.38
LINC00588Q9Y4M8 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00588Q9Y4M8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 AL162741.1-201ENST00000565563 1558 ntBASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 AC009065.1-201ENST00000564055 1225 ntBASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 AC011498.5-201ENST00000592027 486 ntBASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 PBK-203ENST00000522944 1499 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms