Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
UBQLN1Q9UMX0 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.92■□□□□ 0.78
UBQLN1Q9UMX0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.92■□□□□ 0.78
UBQLN1Q9UMX0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN1Q9UMX0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN1Q9UMX0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.92■□□□□ 0.78
UBQLN1Q9UMX0 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN1Q9UMX0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.92■□□□□ 0.78
UBQLN1Q9UMX0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.92■□□□□ 0.78
UBQLN1Q9UMX0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN1Q9UMX0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
UBQLN1Q9UMX0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN1Q9UMX0 AL163051.1-201ENST00000569214 1512 ntBASIC19.92■□□□□ 0.78
UBQLN1Q9UMX0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.91■□□□□ 0.78
UBQLN1Q9UMX0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBQLN1Q9UMX0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
UBQLN1Q9UMX0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
UBQLN1Q9UMX0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.91■□□□□ 0.78
UBQLN1Q9UMX0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.91■□□□□ 0.78
UBQLN1Q9UMX0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBQLN1Q9UMX0 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBQLN1Q9UMX0 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.91■□□□□ 0.78
UBQLN1Q9UMX0 UPK3BP1-201ENST00000428678 509 ntBASIC19.91■□□□□ 0.78
UBQLN1Q9UMX0 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBQLN1Q9UMX0 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.91■□□□□ 0.78
UBQLN1Q9UMX0 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.91■□□□□ 0.78
UBQLN1Q9UMX0 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.91■□□□□ 0.78
UBQLN1Q9UMX0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBQLN1Q9UMX0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
UBQLN1Q9UMX0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBQLN1Q9UMX0 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
UBQLN1Q9UMX0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.91■□□□□ 0.78
UBQLN1Q9UMX0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
UBQLN1Q9UMX0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBQLN1Q9UMX0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
UBQLN1Q9UMX0 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBQLN1Q9UMX0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBQLN1Q9UMX0 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBQLN1Q9UMX0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.91■□□□□ 0.78
UBQLN1Q9UMX0 AC093525.10-201ENST00000625130 1569 ntBASIC19.91■□□□□ 0.78
UBQLN1Q9UMX0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBQLN1Q9UMX0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBQLN1Q9UMX0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.9■□□□□ 0.78
UBQLN1Q9UMX0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBQLN1Q9UMX0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBQLN1Q9UMX0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBQLN1Q9UMX0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBQLN1Q9UMX0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBQLN1Q9UMX0 MIR662-201ENST00000384847 95 ntBASIC19.9■□□□□ 0.78
UBQLN1Q9UMX0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.9■□□□□ 0.78
UBQLN1Q9UMX0 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.9■□□□□ 0.78
UBQLN1Q9UMX0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBQLN1Q9UMX0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBQLN1Q9UMX0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.9■□□□□ 0.78
UBQLN1Q9UMX0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.9■□□□□ 0.78
UBQLN1Q9UMX0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.9■□□□□ 0.78
UBQLN1Q9UMX0 AC120498.9-201ENST00000339021 3867 ntBASIC19.9■□□□□ 0.78
UBQLN1Q9UMX0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
UBQLN1Q9UMX0 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBQLN1Q9UMX0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBQLN1Q9UMX0 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.9■□□□□ 0.78
UBQLN1Q9UMX0 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.9■□□□□ 0.78
UBQLN1Q9UMX0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.9■□□□□ 0.78
UBQLN1Q9UMX0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
UBQLN1Q9UMX0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
UBQLN1Q9UMX0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBQLN1Q9UMX0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBQLN1Q9UMX0 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.89■□□□□ 0.77
UBQLN1Q9UMX0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBQLN1Q9UMX0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
UBQLN1Q9UMX0 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.89■□□□□ 0.77
UBQLN1Q9UMX0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.89■□□□□ 0.77
UBQLN1Q9UMX0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.89■□□□□ 0.77
UBQLN1Q9UMX0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UBQLN1Q9UMX0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
UBQLN1Q9UMX0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
UBQLN1Q9UMX0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBQLN1Q9UMX0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBQLN1Q9UMX0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.88■□□□□ 0.77
UBQLN1Q9UMX0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBQLN1Q9UMX0 MYLKP1-201ENST00000509077 1580 ntBASIC19.88■□□□□ 0.77
UBQLN1Q9UMX0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBQLN1Q9UMX0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBQLN1Q9UMX0 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.88■□□□□ 0.77
UBQLN1Q9UMX0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
UBQLN1Q9UMX0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.88■□□□□ 0.77
UBQLN1Q9UMX0 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.88■□□□□ 0.77
UBQLN1Q9UMX0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.88■□□□□ 0.77
UBQLN1Q9UMX0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.88■□□□□ 0.77
UBQLN1Q9UMX0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.88■□□□□ 0.77
UBQLN1Q9UMX0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBQLN1Q9UMX0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.88■□□□□ 0.77
UBQLN1Q9UMX0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UBQLN1Q9UMX0 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UBQLN1Q9UMX0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBQLN1Q9UMX0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UBQLN1Q9UMX0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UBQLN1Q9UMX0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBQLN1Q9UMX0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UBQLN1Q9UMX0 AL162741.1-201ENST00000565563 1558 ntBASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms