Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.3■□□□□ 0.52
VTI1BQ9UEU0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.29■□□□□ 0.52
VTI1BQ9UEU0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTI1BQ9UEU0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.29■□□□□ 0.52
VTI1BQ9UEU0 LTB4R2-202ENST00000528054 3092 ntBASIC18.29■□□□□ 0.52
VTI1BQ9UEU0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTI1BQ9UEU0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTI1BQ9UEU0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
VTI1BQ9UEU0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.29■□□□□ 0.52
VTI1BQ9UEU0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.29■□□□□ 0.52
VTI1BQ9UEU0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.29■□□□□ 0.52
VTI1BQ9UEU0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.29■□□□□ 0.52
VTI1BQ9UEU0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.29■□□□□ 0.52
VTI1BQ9UEU0 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTI1BQ9UEU0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.29■□□□□ 0.52
VTI1BQ9UEU0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTI1BQ9UEU0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.29■□□□□ 0.52
VTI1BQ9UEU0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VTI1BQ9UEU0 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VTI1BQ9UEU0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTI1BQ9UEU0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.29■□□□□ 0.52
VTI1BQ9UEU0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTI1BQ9UEU0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTI1BQ9UEU0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTI1BQ9UEU0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
VTI1BQ9UEU0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.29■□□□□ 0.52
VTI1BQ9UEU0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.29■□□□□ 0.52
VTI1BQ9UEU0 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 SLC25A6P5-201ENST00000435663 894 ntBASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 C1QL1P1-201ENST00000568105 661 ntBASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 AC112777.1-201ENST00000540175 1423 ntBASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 AL135905.2-201ENST00000584934 1404 ntBASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
VTI1BQ9UEU0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
VTI1BQ9UEU0 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VTI1BQ9UEU0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VTI1BQ9UEU0 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.27■□□□□ 0.52
VTI1BQ9UEU0 HTR7P1-201ENST00000538670 1336 ntBASIC18.27■□□□□ 0.52
VTI1BQ9UEU0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
VTI1BQ9UEU0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VTI1BQ9UEU0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.27■□□□□ 0.52
VTI1BQ9UEU0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VTI1BQ9UEU0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.27■□□□□ 0.52
VTI1BQ9UEU0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VTI1BQ9UEU0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.27■□□□□ 0.52
VTI1BQ9UEU0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VTI1BQ9UEU0 AL353807.1-201ENST00000427475 662 ntBASIC18.27■□□□□ 0.52
VTI1BQ9UEU0 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.27■□□□□ 0.52
VTI1BQ9UEU0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VTI1BQ9UEU0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms