Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PPARGC1AQ9UBK2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PPARGC1AQ9UBK2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PPARGC1AQ9UBK2 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
PPARGC1AQ9UBK2 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PPARGC1AQ9UBK2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PPARGC1AQ9UBK2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PPARGC1AQ9UBK2 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.34■□□□□ 0.69
PPARGC1AQ9UBK2 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PPARGC1AQ9UBK2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PPARGC1AQ9UBK2 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PPARGC1AQ9UBK2 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PPARGC1AQ9UBK2 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PPARGC1AQ9UBK2 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
PPARGC1AQ9UBK2 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PPARGC1AQ9UBK2 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
PPARGC1AQ9UBK2 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.34■□□□□ 0.69
PPARGC1AQ9UBK2 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.34■□□□□ 0.69
PPARGC1AQ9UBK2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PPARGC1AQ9UBK2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
PPARGC1AQ9UBK2 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PPARGC1AQ9UBK2 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.34■□□□□ 0.69
PPARGC1AQ9UBK2 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PPARGC1AQ9UBK2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.34■□□□□ 0.69
PPARGC1AQ9UBK2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PPARGC1AQ9UBK2 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PPARGC1AQ9UBK2 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PPARGC1AQ9UBK2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PPARGC1AQ9UBK2 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PPARGC1AQ9UBK2 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
PPARGC1AQ9UBK2 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PPARGC1AQ9UBK2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PPARGC1AQ9UBK2 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.33■□□□□ 0.69
PPARGC1AQ9UBK2 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
PPARGC1AQ9UBK2 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PPARGC1AQ9UBK2 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PPARGC1AQ9UBK2 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
PPARGC1AQ9UBK2 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.33■□□□□ 0.69
PPARGC1AQ9UBK2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PPARGC1AQ9UBK2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PPARGC1AQ9UBK2 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PPARGC1AQ9UBK2 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PPARGC1AQ9UBK2 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PPARGC1AQ9UBK2 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PPARGC1AQ9UBK2 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PPARGC1AQ9UBK2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PPARGC1AQ9UBK2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
PPARGC1AQ9UBK2 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.33■□□□□ 0.68
PPARGC1AQ9UBK2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.33■□□□□ 0.68
PPARGC1AQ9UBK2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.33■□□□□ 0.68
PPARGC1AQ9UBK2 MIR3180-5-201ENST00000583743 153 ntBASIC19.33■□□□□ 0.68
PPARGC1AQ9UBK2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PPARGC1AQ9UBK2 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PPARGC1AQ9UBK2 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.33■□□□□ 0.68
PPARGC1AQ9UBK2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.33■□□□□ 0.68
PPARGC1AQ9UBK2 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PPARGC1AQ9UBK2 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PPARGC1AQ9UBK2 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
PPARGC1AQ9UBK2 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PPARGC1AQ9UBK2 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.33■□□□□ 0.68
PPARGC1AQ9UBK2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PPARGC1AQ9UBK2 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.33■□□□□ 0.68
PPARGC1AQ9UBK2 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PPARGC1AQ9UBK2 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
PPARGC1AQ9UBK2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.32■□□□□ 0.68
PPARGC1AQ9UBK2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PPARGC1AQ9UBK2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PPARGC1AQ9UBK2 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
PPARGC1AQ9UBK2 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PPARGC1AQ9UBK2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PPARGC1AQ9UBK2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.32■□□□□ 0.68
PPARGC1AQ9UBK2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.32■□□□□ 0.68
PPARGC1AQ9UBK2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.32■□□□□ 0.68
PPARGC1AQ9UBK2 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.32■□□□□ 0.68
PPARGC1AQ9UBK2 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PPARGC1AQ9UBK2 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.32■□□□□ 0.68
PPARGC1AQ9UBK2 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PPARGC1AQ9UBK2 CR769767.2-201ENST00000622735 460 ntBASIC19.32■□□□□ 0.68
PPARGC1AQ9UBK2 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PPARGC1AQ9UBK2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PPARGC1AQ9UBK2 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.32■□□□□ 0.68
PPARGC1AQ9UBK2 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.32■□□□□ 0.68
PPARGC1AQ9UBK2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
PPARGC1AQ9UBK2 KRT8P45-201ENST00000414328 1447 ntBASIC19.32■□□□□ 0.68
PPARGC1AQ9UBK2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PPARGC1AQ9UBK2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PPARGC1AQ9UBK2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PPARGC1AQ9UBK2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.32■□□□□ 0.68
PPARGC1AQ9UBK2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PPARGC1AQ9UBK2 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PPARGC1AQ9UBK2 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.31■□□□□ 0.68
PPARGC1AQ9UBK2 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PPARGC1AQ9UBK2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PPARGC1AQ9UBK2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PPARGC1AQ9UBK2 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PPARGC1AQ9UBK2 AC008556.1-201ENST00000610908 2040 ntBASIC19.31■□□□□ 0.68
PPARGC1AQ9UBK2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PPARGC1AQ9UBK2 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PPARGC1AQ9UBK2 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.31■□□□□ 0.68
PPARGC1AQ9UBK2 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms