Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COMMD3Q9UBI1 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
COMMD3Q9UBI1 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.35■□□□□ 0.21
COMMD3Q9UBI1 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COMMD3Q9UBI1 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COMMD3Q9UBI1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COMMD3Q9UBI1 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COMMD3Q9UBI1 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COMMD3Q9UBI1 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COMMD3Q9UBI1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
COMMD3Q9UBI1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COMMD3Q9UBI1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.35■□□□□ 0.21
COMMD3Q9UBI1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.35■□□□□ 0.21
COMMD3Q9UBI1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.35■□□□□ 0.21
COMMD3Q9UBI1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.35■□□□□ 0.21
COMMD3Q9UBI1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COMMD3Q9UBI1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COMMD3Q9UBI1 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COMMD3Q9UBI1 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
COMMD3Q9UBI1 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
COMMD3Q9UBI1 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.35■□□□□ 0.21
COMMD3Q9UBI1 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
COMMD3Q9UBI1 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COMMD3Q9UBI1 AC068338.2-201ENST00000563278 1430 ntBASIC16.35■□□□□ 0.21
COMMD3Q9UBI1 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COMMD3Q9UBI1 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
COMMD3Q9UBI1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.35■□□□□ 0.21
COMMD3Q9UBI1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
COMMD3Q9UBI1 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COMMD3Q9UBI1 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
COMMD3Q9UBI1 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
COMMD3Q9UBI1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.34■□□□□ 0.21
COMMD3Q9UBI1 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COMMD3Q9UBI1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
COMMD3Q9UBI1 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.34■□□□□ 0.21
COMMD3Q9UBI1 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
COMMD3Q9UBI1 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COMMD3Q9UBI1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COMMD3Q9UBI1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC16.34■□□□□ 0.21
COMMD3Q9UBI1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COMMD3Q9UBI1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.34■□□□□ 0.21
COMMD3Q9UBI1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COMMD3Q9UBI1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.34■□□□□ 0.21
COMMD3Q9UBI1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.34■□□□□ 0.21
COMMD3Q9UBI1 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COMMD3Q9UBI1 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COMMD3Q9UBI1 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
COMMD3Q9UBI1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COMMD3Q9UBI1 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COMMD3Q9UBI1 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
COMMD3Q9UBI1 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
COMMD3Q9UBI1 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
COMMD3Q9UBI1 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COMMD3Q9UBI1 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
COMMD3Q9UBI1 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
COMMD3Q9UBI1 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COMMD3Q9UBI1 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.34■□□□□ 0.21
COMMD3Q9UBI1 HEIH-201ENST00000623091 1652 ntBASIC16.34■□□□□ 0.21
COMMD3Q9UBI1 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
COMMD3Q9UBI1 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
COMMD3Q9UBI1 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
COMMD3Q9UBI1 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
COMMD3Q9UBI1 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.33■□□□□ 0.21
COMMD3Q9UBI1 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
COMMD3Q9UBI1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
COMMD3Q9UBI1 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
COMMD3Q9UBI1 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
COMMD3Q9UBI1 AC141586.5-201ENST00000624546 2050 ntBASIC16.33■□□□□ 0.21
COMMD3Q9UBI1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
COMMD3Q9UBI1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
COMMD3Q9UBI1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COMMD3Q9UBI1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.33■□□□□ 0.2
COMMD3Q9UBI1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
COMMD3Q9UBI1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
COMMD3Q9UBI1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
COMMD3Q9UBI1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COMMD3Q9UBI1 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COMMD3Q9UBI1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COMMD3Q9UBI1 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COMMD3Q9UBI1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.33■□□□□ 0.2
COMMD3Q9UBI1 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COMMD3Q9UBI1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
COMMD3Q9UBI1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
COMMD3Q9UBI1 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.33■□□□□ 0.2
COMMD3Q9UBI1 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
COMMD3Q9UBI1 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.33■□□□□ 0.2
COMMD3Q9UBI1 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COMMD3Q9UBI1 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms