Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.26■□□□□ 0.83
CALCOCO1Q9P1Z2 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.26■□□□□ 0.83
CALCOCO1Q9P1Z2 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.26■□□□□ 0.83
CALCOCO1Q9P1Z2 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CALCOCO1Q9P1Z2 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.26■□□□□ 0.83
CALCOCO1Q9P1Z2 AL355075.4-201ENST00000554988 638 ntBASIC20.26■□□□□ 0.83
CALCOCO1Q9P1Z2 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
CALCOCO1Q9P1Z2 AC133561.5-201ENST00000635547 218 ntBASIC20.26■□□□□ 0.83
CALCOCO1Q9P1Z2 HLA-A-209ENST00000638375 975 ntBASIC20.26■□□□□ 0.83
CALCOCO1Q9P1Z2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.26■□□□□ 0.83
CALCOCO1Q9P1Z2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.26■□□□□ 0.83
CALCOCO1Q9P1Z2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CALCOCO1Q9P1Z2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
CALCOCO1Q9P1Z2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CALCOCO1Q9P1Z2 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CALCOCO1Q9P1Z2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CALCOCO1Q9P1Z2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CALCOCO1Q9P1Z2 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.26■□□□□ 0.83
CALCOCO1Q9P1Z2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CALCOCO1Q9P1Z2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CALCOCO1Q9P1Z2 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CALCOCO1Q9P1Z2 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.25■□□□□ 0.83
CALCOCO1Q9P1Z2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.25■□□□□ 0.83
CALCOCO1Q9P1Z2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.25■□□□□ 0.83
CALCOCO1Q9P1Z2 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CALCOCO1Q9P1Z2 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.25■□□□□ 0.83
CALCOCO1Q9P1Z2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.25■□□□□ 0.83
CALCOCO1Q9P1Z2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CALCOCO1Q9P1Z2 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CALCOCO1Q9P1Z2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CALCOCO1Q9P1Z2 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CALCOCO1Q9P1Z2 LTF-203ENST00000426532 2494 ntTSL 2 BASIC20.25■□□□□ 0.83
CALCOCO1Q9P1Z2 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CALCOCO1Q9P1Z2 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CALCOCO1Q9P1Z2 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CALCOCO1Q9P1Z2 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CALCOCO1Q9P1Z2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.25■□□□□ 0.83
CALCOCO1Q9P1Z2 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CALCOCO1Q9P1Z2 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.25■□□□□ 0.83
CALCOCO1Q9P1Z2 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.25■□□□□ 0.83
CALCOCO1Q9P1Z2 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.25■□□□□ 0.83
CALCOCO1Q9P1Z2 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.25■□□□□ 0.83
CALCOCO1Q9P1Z2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.25■□□□□ 0.83
CALCOCO1Q9P1Z2 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CALCOCO1Q9P1Z2 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.25■□□□□ 0.83
CALCOCO1Q9P1Z2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.25■□□□□ 0.83
CALCOCO1Q9P1Z2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CALCOCO1Q9P1Z2 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CALCOCO1Q9P1Z2 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CALCOCO1Q9P1Z2 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CALCOCO1Q9P1Z2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CALCOCO1Q9P1Z2 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CALCOCO1Q9P1Z2 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CALCOCO1Q9P1Z2 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CALCOCO1Q9P1Z2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CALCOCO1Q9P1Z2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.24■□□□□ 0.83
CALCOCO1Q9P1Z2 AC067852.2-201ENST00000590513 2313 ntBASIC20.24■□□□□ 0.83
CALCOCO1Q9P1Z2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
CALCOCO1Q9P1Z2 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CALCOCO1Q9P1Z2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.24■□□□□ 0.83
CALCOCO1Q9P1Z2 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.24■□□□□ 0.83
CALCOCO1Q9P1Z2 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CALCOCO1Q9P1Z2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.24■□□□□ 0.83
CALCOCO1Q9P1Z2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.24■□□□□ 0.83
CALCOCO1Q9P1Z2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.24■□□□□ 0.83
CALCOCO1Q9P1Z2 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CALCOCO1Q9P1Z2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CALCOCO1Q9P1Z2 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CALCOCO1Q9P1Z2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CALCOCO1Q9P1Z2 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CALCOCO1Q9P1Z2 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CALCOCO1Q9P1Z2 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CALCOCO1Q9P1Z2 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CALCOCO1Q9P1Z2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CALCOCO1Q9P1Z2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CALCOCO1Q9P1Z2 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CALCOCO1Q9P1Z2 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.23■□□□□ 0.83
CALCOCO1Q9P1Z2 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CALCOCO1Q9P1Z2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.23■□□□□ 0.83
CALCOCO1Q9P1Z2 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.23■□□□□ 0.83
CALCOCO1Q9P1Z2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.23■□□□□ 0.83
CALCOCO1Q9P1Z2 AC010331.1-201ENST00000611423 582 ntBASIC20.23■□□□□ 0.83
CALCOCO1Q9P1Z2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CALCOCO1Q9P1Z2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CALCOCO1Q9P1Z2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CALCOCO1Q9P1Z2 AC104417.2-201ENST00000562989 1793 ntBASIC20.23■□□□□ 0.83
CALCOCO1Q9P1Z2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CALCOCO1Q9P1Z2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.23■□□□□ 0.83
CALCOCO1Q9P1Z2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CALCOCO1Q9P1Z2 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.23■□□□□ 0.83
CALCOCO1Q9P1Z2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CALCOCO1Q9P1Z2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CALCOCO1Q9P1Z2 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CALCOCO1Q9P1Z2 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CALCOCO1Q9P1Z2 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CALCOCO1Q9P1Z2 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CALCOCO1Q9P1Z2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CALCOCO1Q9P1Z2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CALCOCO1Q9P1Z2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CALCOCO1Q9P1Z2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms