Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 NFIC-211ENST00000641145 8399 ntBASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 AC008550.1-201ENST00000511500 884 ntBASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.46■□□□□ 0.07
LIN7CQ9NUP9 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.46■□□□□ 0.07
LIN7CQ9NUP9 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.46■□□□□ 0.07
LIN7CQ9NUP9 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.46■□□□□ 0.07
LIN7CQ9NUP9 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LIN7CQ9NUP9 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.46■□□□□ 0.07
LIN7CQ9NUP9 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.46■□□□□ 0.07
LIN7CQ9NUP9 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.46■□□□□ 0.07
LIN7CQ9NUP9 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LIN7CQ9NUP9 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LIN7CQ9NUP9 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
LIN7CQ9NUP9 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
LIN7CQ9NUP9 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.46■□□□□ 0.07
LIN7CQ9NUP9 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
LIN7CQ9NUP9 NIFKP9-201ENST00000419265 221 ntBASIC15.46■□□□□ 0.07
LIN7CQ9NUP9 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LIN7CQ9NUP9 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
LIN7CQ9NUP9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC15.46■□□□□ 0.07
LIN7CQ9NUP9 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.46■□□□□ 0.07
LIN7CQ9NUP9 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LIN7CQ9NUP9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC15.46■□□□□ 0.07
LIN7CQ9NUP9 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LIN7CQ9NUP9 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LIN7CQ9NUP9 AC005332.8-201ENST00000622750 2735 ntBASIC15.46■□□□□ 0.07
LIN7CQ9NUP9 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.46■□□□□ 0.07
LIN7CQ9NUP9 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LIN7CQ9NUP9 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
LIN7CQ9NUP9 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LIN7CQ9NUP9 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
LIN7CQ9NUP9 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
LIN7CQ9NUP9 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.06
LIN7CQ9NUP9 AC126763.1-201ENST00000552015 2118 ntBASIC15.46■□□□□ 0.06
LIN7CQ9NUP9 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC15.46■□□□□ 0.06
LIN7CQ9NUP9 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
LIN7CQ9NUP9 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 HEIH-201ENST00000623091 1652 ntBASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 RPS2P55-201ENST00000397318 883 ntBASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 KSR1P1-201ENST00000446298 240 ntBASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 AC107956.1-201ENST00000494359 873 ntBASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms