Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC23.82■■□□□ 1.4
SMC4Q9NTJ3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMC4Q9NTJ3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMC4Q9NTJ3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
SMC4Q9NTJ3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMC4Q9NTJ3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMC4Q9NTJ3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SMC4Q9NTJ3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMC4Q9NTJ3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SMC4Q9NTJ3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMC4Q9NTJ3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SMC4Q9NTJ3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC23.82■■□□□ 1.4
SMC4Q9NTJ3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC23.82■■□□□ 1.4
SMC4Q9NTJ3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SMC4Q9NTJ3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMC4Q9NTJ3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMC4Q9NTJ3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMC4Q9NTJ3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC23.82■■□□□ 1.4
SMC4Q9NTJ3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMC4Q9NTJ3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC23.82■■□□□ 1.4
SMC4Q9NTJ3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC23.82■■□□□ 1.4
SMC4Q9NTJ3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMC4Q9NTJ3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC23.82■■□□□ 1.4
SMC4Q9NTJ3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMC4Q9NTJ3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMC4Q9NTJ3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
SMC4Q9NTJ3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
SMC4Q9NTJ3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC23.81■■□□□ 1.4
SMC4Q9NTJ3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
SMC4Q9NTJ3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMC4Q9NTJ3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
SMC4Q9NTJ3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC23.81■■□□□ 1.4
SMC4Q9NTJ3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC23.81■■□□□ 1.4
SMC4Q9NTJ3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC23.81■■□□□ 1.4
SMC4Q9NTJ3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMC4Q9NTJ3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SMC4Q9NTJ3 ECEL1P3-201ENST00000427961 737 ntBASIC23.81■■□□□ 1.4
SMC4Q9NTJ3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
SMC4Q9NTJ3 AC010203.1-204ENST00000548782 407 ntBASIC23.81■■□□□ 1.4
SMC4Q9NTJ3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC23.81■■□□□ 1.4
SMC4Q9NTJ3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
SMC4Q9NTJ3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SMC4Q9NTJ3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC23.81■■□□□ 1.4
SMC4Q9NTJ3 NEFHP1-201ENST00000412845 2629 ntBASIC23.81■■□□□ 1.4
SMC4Q9NTJ3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMC4Q9NTJ3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC23.81■■□□□ 1.4
SMC4Q9NTJ3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMC4Q9NTJ3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMC4Q9NTJ3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMC4Q9NTJ3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC23.81■■□□□ 1.4
SMC4Q9NTJ3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMC4Q9NTJ3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC23.8■■□□□ 1.4
SMC4Q9NTJ3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SMC4Q9NTJ3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMC4Q9NTJ3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMC4Q9NTJ3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMC4Q9NTJ3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
SMC4Q9NTJ3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMC4Q9NTJ3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC23.8■■□□□ 1.4
SMC4Q9NTJ3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC23.8■■□□□ 1.4
SMC4Q9NTJ3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC23.8■■□□□ 1.4
SMC4Q9NTJ3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
SMC4Q9NTJ3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMC4Q9NTJ3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
SMC4Q9NTJ3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMC4Q9NTJ3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SMC4Q9NTJ3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC23.8■■□□□ 1.4
SMC4Q9NTJ3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC23.8■■□□□ 1.4
SMC4Q9NTJ3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC23.8■■□□□ 1.4
SMC4Q9NTJ3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC23.8■■□□□ 1.4
SMC4Q9NTJ3 HOXB1-202ENST00000577092 1414 ntBASIC23.8■■□□□ 1.4
SMC4Q9NTJ3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMC4Q9NTJ3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC23.8■■□□□ 1.4
SMC4Q9NTJ3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC23.79■■□□□ 1.4
SMC4Q9NTJ3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC23.79■■□□□ 1.4
SMC4Q9NTJ3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC4Q9NTJ3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SMC4Q9NTJ3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC4Q9NTJ3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
SMC4Q9NTJ3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC4Q9NTJ3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
SMC4Q9NTJ3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC4Q9NTJ3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC23.79■■□□□ 1.4
SMC4Q9NTJ3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC4Q9NTJ3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
SMC4Q9NTJ3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC4Q9NTJ3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC23.79■■□□□ 1.4
SMC4Q9NTJ3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC4Q9NTJ3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC4Q9NTJ3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC23.79■■□□□ 1.4
SMC4Q9NTJ3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC4Q9NTJ3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SMC4Q9NTJ3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC23.78■■□□□ 1.4
SMC4Q9NTJ3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMC4Q9NTJ3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMC4Q9NTJ3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SMC4Q9NTJ3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMC4Q9NTJ3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMC4Q9NTJ3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
SMC4Q9NTJ3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms