Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
VPS45Q9NRW7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS45Q9NRW7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.18■□□□□ 0.66
VPS45Q9NRW7 CROCCP3-202ENST00000420820 1947 ntBASIC19.17■□□□□ 0.66
VPS45Q9NRW7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
VPS45Q9NRW7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS45Q9NRW7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.17■□□□□ 0.66
VPS45Q9NRW7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS45Q9NRW7 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.17■□□□□ 0.66
VPS45Q9NRW7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS45Q9NRW7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VPS45Q9NRW7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VPS45Q9NRW7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VPS45Q9NRW7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS45Q9NRW7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.17■□□□□ 0.66
VPS45Q9NRW7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.17■□□□□ 0.66
VPS45Q9NRW7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS45Q9NRW7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.17■□□□□ 0.66
VPS45Q9NRW7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.17■□□□□ 0.66
VPS45Q9NRW7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
VPS45Q9NRW7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.17■□□□□ 0.66
VPS45Q9NRW7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.17■□□□□ 0.66
VPS45Q9NRW7 ZNF444P1-201ENST00000559497 298 ntBASIC19.17■□□□□ 0.66
VPS45Q9NRW7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.17■□□□□ 0.66
VPS45Q9NRW7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.17■□□□□ 0.66
VPS45Q9NRW7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.17■□□□□ 0.66
VPS45Q9NRW7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.17■□□□□ 0.66
VPS45Q9NRW7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS45Q9NRW7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
VPS45Q9NRW7 AC093525.10-201ENST00000625130 1569 ntBASIC19.17■□□□□ 0.66
VPS45Q9NRW7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.17■□□□□ 0.66
VPS45Q9NRW7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
VPS45Q9NRW7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS45Q9NRW7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
VPS45Q9NRW7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VPS45Q9NRW7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
VPS45Q9NRW7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.17■□□□□ 0.66
VPS45Q9NRW7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS45Q9NRW7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
VPS45Q9NRW7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
VPS45Q9NRW7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.16■□□□□ 0.66
VPS45Q9NRW7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS45Q9NRW7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS45Q9NRW7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS45Q9NRW7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.16■□□□□ 0.66
VPS45Q9NRW7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VPS45Q9NRW7 ATP5G2P1-201ENST00000433580 426 ntBASIC19.16■□□□□ 0.66
VPS45Q9NRW7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VPS45Q9NRW7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.16■□□□□ 0.66
VPS45Q9NRW7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.16■□□□□ 0.66
VPS45Q9NRW7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.16■□□□□ 0.66
VPS45Q9NRW7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VPS45Q9NRW7 AC012313.10-201ENST00000623509 926 ntBASIC19.16■□□□□ 0.66
VPS45Q9NRW7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
VPS45Q9NRW7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
VPS45Q9NRW7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS45Q9NRW7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VPS45Q9NRW7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
VPS45Q9NRW7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS45Q9NRW7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.16■□□□□ 0.66
VPS45Q9NRW7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
VPS45Q9NRW7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
VPS45Q9NRW7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS45Q9NRW7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VPS45Q9NRW7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
VPS45Q9NRW7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS45Q9NRW7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VPS45Q9NRW7 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.15■□□□□ 0.66
VPS45Q9NRW7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS45Q9NRW7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS45Q9NRW7 AC112907.2-201ENST00000448639 330 ntBASIC19.15■□□□□ 0.66
VPS45Q9NRW7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS45Q9NRW7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
VPS45Q9NRW7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VPS45Q9NRW7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VPS45Q9NRW7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.15■□□□□ 0.66
VPS45Q9NRW7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
VPS45Q9NRW7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS45Q9NRW7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VPS45Q9NRW7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS45Q9NRW7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS45Q9NRW7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS45Q9NRW7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
VPS45Q9NRW7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS45Q9NRW7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.15■□□□□ 0.66
VPS45Q9NRW7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS45Q9NRW7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.15■□□□□ 0.66
VPS45Q9NRW7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VPS45Q9NRW7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
VPS45Q9NRW7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.14■□□□□ 0.66
VPS45Q9NRW7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.14■□□□□ 0.66
VPS45Q9NRW7 AC093503.3-201ENST00000624917 2352 ntBASIC19.14■□□□□ 0.66
VPS45Q9NRW7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
VPS45Q9NRW7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
VPS45Q9NRW7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VPS45Q9NRW7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
VPS45Q9NRW7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VPS45Q9NRW7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.14■□□□□ 0.65
VPS45Q9NRW7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.14■□□□□ 0.65
VPS45Q9NRW7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms