Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SLC52A3Q9NQ40 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC52A3Q9NQ40 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SLC52A3Q9NQ40 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC52A3Q9NQ40 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC52A3Q9NQ40 MIR564-202ENST00000385049 94 ntBASIC17.6■□□□□ 0.41
SLC52A3Q9NQ40 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.6■□□□□ 0.41
SLC52A3Q9NQ40 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC52A3Q9NQ40 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC52A3Q9NQ40 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC52A3Q9NQ40 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.6■□□□□ 0.41
SLC52A3Q9NQ40 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC52A3Q9NQ40 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC52A3Q9NQ40 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SLC52A3Q9NQ40 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.6■□□□□ 0.41
SLC52A3Q9NQ40 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC52A3Q9NQ40 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC52A3Q9NQ40 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.6■□□□□ 0.41
SLC52A3Q9NQ40 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC52A3Q9NQ40 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC52A3Q9NQ40 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC52A3Q9NQ40 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC52A3Q9NQ40 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC52A3Q9NQ40 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC52A3Q9NQ40 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 RN7SL471P-201ENST00000580476 299 ntBASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC52A3Q9NQ40 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.58■□□□□ 0.41
SLC52A3Q9NQ40 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SLC52A3Q9NQ40 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.58■□□□□ 0.41
SLC52A3Q9NQ40 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SLC52A3Q9NQ40 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC52A3Q9NQ40 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.58■□□□□ 0.41
SLC52A3Q9NQ40 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SLC52A3Q9NQ40 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
SLC52A3Q9NQ40 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
SLC52A3Q9NQ40 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC52A3Q9NQ40 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC52A3Q9NQ40 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC52A3Q9NQ40 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.58■□□□□ 0.4
SLC52A3Q9NQ40 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC52A3Q9NQ40 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC52A3Q9NQ40 AL355802.2-201ENST00000402069 882 ntBASIC17.58■□□□□ 0.4
SLC52A3Q9NQ40 AC011506.1-201ENST00000474329 610 ntBASIC17.58■□□□□ 0.4
SLC52A3Q9NQ40 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.58■□□□□ 0.4
SLC52A3Q9NQ40 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
SLC52A3Q9NQ40 RNA5SP413-201ENST00000516373 109 ntBASIC17.58■□□□□ 0.4
SLC52A3Q9NQ40 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.58■□□□□ 0.4
SLC52A3Q9NQ40 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC52A3Q9NQ40 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC52A3Q9NQ40 AC011298.2-201ENST00000617989 482 ntBASIC17.58■□□□□ 0.4
SLC52A3Q9NQ40 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
SLC52A3Q9NQ40 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.58■□□□□ 0.4
SLC52A3Q9NQ40 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC52A3Q9NQ40 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC52A3Q9NQ40 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
SLC52A3Q9NQ40 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC52A3Q9NQ40 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.58■□□□□ 0.4
SLC52A3Q9NQ40 AC006116.8-202ENST00000587620 1550 ntBASIC17.57■□□□□ 0.4
SLC52A3Q9NQ40 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC52A3Q9NQ40 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SLC52A3Q9NQ40 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC52A3Q9NQ40 KRT8P50-201ENST00000562022 1438 ntBASIC17.57■□□□□ 0.4
SLC52A3Q9NQ40 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC52A3Q9NQ40 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC52A3Q9NQ40 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC52A3Q9NQ40 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms