Protein–RNA interactions for Protein: Q9NPA1

KCNMB3, Calcium-activated potassium channel subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3Q9NPA1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.84■□□□□ 0.93
KCNMB3Q9NPA1 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.84■□□□□ 0.93
KCNMB3Q9NPA1 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNMB3Q9NPA1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.84■□□□□ 0.93
KCNMB3Q9NPA1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
KCNMB3Q9NPA1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
KCNMB3Q9NPA1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
KCNMB3Q9NPA1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
KCNMB3Q9NPA1 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.84■□□□□ 0.93
KCNMB3Q9NPA1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.84■□□□□ 0.93
KCNMB3Q9NPA1 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
KCNMB3Q9NPA1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
KCNMB3Q9NPA1 SDHAP2-201ENST00000455183 2001 ntBASIC20.83■□□□□ 0.93
KCNMB3Q9NPA1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
KCNMB3Q9NPA1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.83■□□□□ 0.93
KCNMB3Q9NPA1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KCNMB3Q9NPA1 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.83■□□□□ 0.93
KCNMB3Q9NPA1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.83■□□□□ 0.93
KCNMB3Q9NPA1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.83■□□□□ 0.93
KCNMB3Q9NPA1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
KCNMB3Q9NPA1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KCNMB3Q9NPA1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
KCNMB3Q9NPA1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KCNMB3Q9NPA1 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KCNMB3Q9NPA1 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KCNMB3Q9NPA1 MIR149-201ENST00000384879 89 ntBASIC20.83■□□□□ 0.93
KCNMB3Q9NPA1 LINC01238-205ENST00000567549 1107 ntBASIC20.83■□□□□ 0.93
KCNMB3Q9NPA1 NTF6B-201ENST00000591913 560 ntBASIC20.83■□□□□ 0.93
KCNMB3Q9NPA1 AL590326.2-201ENST00000625139 305 ntBASIC20.83■□□□□ 0.93
KCNMB3Q9NPA1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
KCNMB3Q9NPA1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
KCNMB3Q9NPA1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
KCNMB3Q9NPA1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
KCNMB3Q9NPA1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
KCNMB3Q9NPA1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
KCNMB3Q9NPA1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.82■□□□□ 0.92
KCNMB3Q9NPA1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNMB3Q9NPA1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
KCNMB3Q9NPA1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
KCNMB3Q9NPA1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNMB3Q9NPA1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNMB3Q9NPA1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.82■□□□□ 0.92
KCNMB3Q9NPA1 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNMB3Q9NPA1 MIR1224-201ENST00000408193 85 ntBASIC20.82■□□□□ 0.92
KCNMB3Q9NPA1 AC112907.2-201ENST00000448639 330 ntBASIC20.82■□□□□ 0.92
KCNMB3Q9NPA1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.82■□□□□ 0.92
KCNMB3Q9NPA1 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.82■□□□□ 0.92
KCNMB3Q9NPA1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNMB3Q9NPA1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNMB3Q9NPA1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.82■□□□□ 0.92
KCNMB3Q9NPA1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
KCNMB3Q9NPA1 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
KCNMB3Q9NPA1 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNMB3Q9NPA1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNMB3Q9NPA1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.82■□□□□ 0.92
KCNMB3Q9NPA1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNMB3Q9NPA1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNMB3Q9NPA1 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNMB3Q9NPA1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KCNMB3Q9NPA1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.81■□□□□ 0.92
KCNMB3Q9NPA1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KCNMB3Q9NPA1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KCNMB3Q9NPA1 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNMB3Q9NPA1 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNMB3Q9NPA1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNMB3Q9NPA1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
KCNMB3Q9NPA1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KCNMB3Q9NPA1 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNMB3Q9NPA1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KCNMB3Q9NPA1 PVRIG2P-201ENST00000435460 978 ntBASIC20.81■□□□□ 0.92
KCNMB3Q9NPA1 AC092597.1-201ENST00000487352 616 ntBASIC20.81■□□□□ 0.92
KCNMB3Q9NPA1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.81■□□□□ 0.92
KCNMB3Q9NPA1 AC009065.1-201ENST00000564055 1225 ntBASIC20.81■□□□□ 0.92
KCNMB3Q9NPA1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.81■□□□□ 0.92
KCNMB3Q9NPA1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KCNMB3Q9NPA1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KCNMB3Q9NPA1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
KCNMB3Q9NPA1 AC009102.3-201ENST00000623118 1491 ntBASIC20.81■□□□□ 0.92
KCNMB3Q9NPA1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.81■□□□□ 0.92
KCNMB3Q9NPA1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNMB3Q9NPA1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KCNMB3Q9NPA1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KCNMB3Q9NPA1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KCNMB3Q9NPA1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KCNMB3Q9NPA1 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
KCNMB3Q9NPA1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KCNMB3Q9NPA1 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
KCNMB3Q9NPA1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
KCNMB3Q9NPA1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KCNMB3Q9NPA1 HLA-F-220ENST00000434407 884 ntBASIC20.8■□□□□ 0.92
KCNMB3Q9NPA1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.8■□□□□ 0.92
KCNMB3Q9NPA1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.8■□□□□ 0.92
KCNMB3Q9NPA1 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.8■□□□□ 0.92
KCNMB3Q9NPA1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.8■□□□□ 0.92
KCNMB3Q9NPA1 AC083849.1-201ENST00000615227 514 ntBASIC20.8■□□□□ 0.92
KCNMB3Q9NPA1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.8■□□□□ 0.92
KCNMB3Q9NPA1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
KCNMB3Q9NPA1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.8■□□□□ 0.92
KCNMB3Q9NPA1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.8■□□□□ 0.92
KCNMB3Q9NPA1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms