Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 UNC93B5-201ENST00000530315 699 ntBASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 AP003097.1-201ENST00000530657 1135 ntBASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 MMAB-206ENST00000540016 945 ntTSL 3 BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 AC060766.5-201ENST00000590539 871 ntBASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 BRWD1-AS2-201ENST00000603064 1028 ntBASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 AC006058.3-201ENST00000606217 1069 ntBASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 HLA-B-256ENST00000639848 1089 ntBASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 AC066615.1-201ENST00000640911 628 ntBASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 PCDH8P1-201ENST00000428983 2773 ntBASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 ABALON-201ENST00000629058 1903 ntBASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 AL136379.1-201ENST00000623471 2642 ntBASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 AC026366.1-201ENST00000488803 879 ntBASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 AC023632.3-201ENST00000521633 145 ntBASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 AP006294.2-201ENST00000641667 209 ntBASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFAF3Q9BU61 PTBP1P-201ENST00000554374 1601 ntBASIC14.33□□□□□ -0.11
NDUFAF3Q9BU61 NKILA-202ENST00000614771 2598 ntBASIC14.33□□□□□ -0.11
NDUFAF3Q9BU61 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NDUFAF3Q9BU61 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC14.33□□□□□ -0.11
NDUFAF3Q9BU61 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NDUFAF3Q9BU61 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms