Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SLC46A1Q96NT5 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.76■□□□□ 0.43
SLC46A1Q96NT5 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.76■□□□□ 0.43
SLC46A1Q96NT5 AC106795.1-205ENST00000512851 1056 ntBASIC17.76■□□□□ 0.43
SLC46A1Q96NT5 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC46A1Q96NT5 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC46A1Q96NT5 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC46A1Q96NT5 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC46A1Q96NT5 AC006538.3-201ENST00000612495 578 ntBASIC17.76■□□□□ 0.43
SLC46A1Q96NT5 AC004263.2-201ENST00000617183 678 ntBASIC17.76■□□□□ 0.43
SLC46A1Q96NT5 AC023511.2-201ENST00000618803 211 ntBASIC17.76■□□□□ 0.43
SLC46A1Q96NT5 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SLC46A1Q96NT5 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC46A1Q96NT5 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SLC46A1Q96NT5 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC46A1Q96NT5 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC46A1Q96NT5 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC46A1Q96NT5 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC46A1Q96NT5 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC46A1Q96NT5 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC46A1Q96NT5 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC46A1Q96NT5 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC46A1Q96NT5 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SLC46A1Q96NT5 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC46A1Q96NT5 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC46A1Q96NT5 KRT8P7-201ENST00000533003 1432 ntBASIC17.75■□□□□ 0.43
SLC46A1Q96NT5 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC46A1Q96NT5 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SLC46A1Q96NT5 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC46A1Q96NT5 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC46A1Q96NT5 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
SLC46A1Q96NT5 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.75■□□□□ 0.43
SLC46A1Q96NT5 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC46A1Q96NT5 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC46A1Q96NT5 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.75■□□□□ 0.43
SLC46A1Q96NT5 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC46A1Q96NT5 AC090616.6-201ENST00000582640 721 ntBASIC17.75■□□□□ 0.43
SLC46A1Q96NT5 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.75■□□□□ 0.43
SLC46A1Q96NT5 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.75■□□□□ 0.43
SLC46A1Q96NT5 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC46A1Q96NT5 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC46A1Q96NT5 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC46A1Q96NT5 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC46A1Q96NT5 Z83836.1-201ENST00000624605 1642 ntBASIC17.75■□□□□ 0.43
SLC46A1Q96NT5 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC46A1Q96NT5 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SLC46A1Q96NT5 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC46A1Q96NT5 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC46A1Q96NT5 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC46A1Q96NT5 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC46A1Q96NT5 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC46A1Q96NT5 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC46A1Q96NT5 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC46A1Q96NT5 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC46A1Q96NT5 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC46A1Q96NT5 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC46A1Q96NT5 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC46A1Q96NT5 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC46A1Q96NT5 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC46A1Q96NT5 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.74■□□□□ 0.43
SLC46A1Q96NT5 AL662844.1-201ENST00000546340 181 ntBASIC17.74■□□□□ 0.43
SLC46A1Q96NT5 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.74■□□□□ 0.43
SLC46A1Q96NT5 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SLC46A1Q96NT5 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SLC46A1Q96NT5 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC46A1Q96NT5 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC46A1Q96NT5 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC46A1Q96NT5 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC46A1Q96NT5 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC46A1Q96NT5 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC46A1Q96NT5 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC46A1Q96NT5 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC46A1Q96NT5 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SLC46A1Q96NT5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC46A1Q96NT5 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SLC46A1Q96NT5 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC46A1Q96NT5 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC46A1Q96NT5 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC46A1Q96NT5 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC46A1Q96NT5 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC46A1Q96NT5 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SLC46A1Q96NT5 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC46A1Q96NT5 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC46A1Q96NT5 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SLC46A1Q96NT5 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC46A1Q96NT5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC46A1Q96NT5 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC46A1Q96NT5 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC46A1Q96NT5 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC46A1Q96NT5 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC46A1Q96NT5 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC46A1Q96NT5 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SLC46A1Q96NT5 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.73■□□□□ 0.43
SLC46A1Q96NT5 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC46A1Q96NT5 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC46A1Q96NT5 AC104819.1-201ENST00000504587 486 ntBASIC17.73■□□□□ 0.43
SLC46A1Q96NT5 AP002469.2-201ENST00000531724 424 ntBASIC17.73■□□□□ 0.43
SLC46A1Q96NT5 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC46A1Q96NT5 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC46A1Q96NT5 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms