Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.15■□□□□ 0.5
PDLIM5Q96HC4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.15■□□□□ 0.5
PDLIM5Q96HC4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.15■□□□□ 0.5
PDLIM5Q96HC4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM5Q96HC4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PDLIM5Q96HC4 AC093677.2-201ENST00000600169 1863 ntBASIC18.15■□□□□ 0.5
PDLIM5Q96HC4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM5Q96HC4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM5Q96HC4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM5Q96HC4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.15■□□□□ 0.5
PDLIM5Q96HC4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM5Q96HC4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM5Q96HC4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.15■□□□□ 0.5
PDLIM5Q96HC4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM5Q96HC4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM5Q96HC4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM5Q96HC4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
PDLIM5Q96HC4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PDLIM5Q96HC4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PDLIM5Q96HC4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM5Q96HC4 AL163051.1-201ENST00000569214 1512 ntBASIC18.14■□□□□ 0.49
PDLIM5Q96HC4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PDLIM5Q96HC4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PDLIM5Q96HC4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PDLIM5Q96HC4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM5Q96HC4 TSPY15P-201ENST00000457163 923 ntBASIC18.14■□□□□ 0.49
PDLIM5Q96HC4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM5Q96HC4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.14■□□□□ 0.49
PDLIM5Q96HC4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM5Q96HC4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.14■□□□□ 0.49
PDLIM5Q96HC4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.14■□□□□ 0.49
PDLIM5Q96HC4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.14■□□□□ 0.49
PDLIM5Q96HC4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM5Q96HC4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM5Q96HC4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM5Q96HC4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.14■□□□□ 0.49
PDLIM5Q96HC4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.14■□□□□ 0.49
PDLIM5Q96HC4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM5Q96HC4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM5Q96HC4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
PDLIM5Q96HC4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM5Q96HC4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PDLIM5Q96HC4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PDLIM5Q96HC4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM5Q96HC4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDLIM5Q96HC4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 AC135776.1-201ENST00000319817 2481 ntBASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 NOC2LP1-202ENST00000452600 2235 ntBASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 AC128688.1-201ENST00000487626 519 ntBASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.13■□□□□ 0.49
PDLIM5Q96HC4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PDLIM5Q96HC4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.12■□□□□ 0.49
PDLIM5Q96HC4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDLIM5Q96HC4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDLIM5Q96HC4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDLIM5Q96HC4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.12■□□□□ 0.49
PDLIM5Q96HC4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
PDLIM5Q96HC4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDLIM5Q96HC4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.12■□□□□ 0.49
PDLIM5Q96HC4 MMP23A-201ENST00000234610 1017 ntBASIC18.12■□□□□ 0.49
PDLIM5Q96HC4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDLIM5Q96HC4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDLIM5Q96HC4 KRT18P23-201ENST00000435622 1283 ntBASIC18.12■□□□□ 0.49
PDLIM5Q96HC4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
PDLIM5Q96HC4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDLIM5Q96HC4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.12■□□□□ 0.49
PDLIM5Q96HC4 MIR3180-4-201ENST00000582223 153 ntBASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms