Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SLC47A1Q96FL8 AC135776.1-201ENST00000319817 2481 ntBASIC17.55■□□□□ 0.4
SLC47A1Q96FL8 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SLC47A1Q96FL8 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC47A1Q96FL8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC47A1Q96FL8 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 KRT18P6-201ENST00000555540 1265 ntBASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 MTDHP1-201ENST00000605323 784 ntBASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 AC069544.1-201ENST00000609399 999 ntBASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC47A1Q96FL8 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC47A1Q96FL8 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC47A1Q96FL8 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC47A1Q96FL8 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC47A1Q96FL8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC47A1Q96FL8 PKD1P1-201ENST00000458669 6805 ntBASIC17.53■□□□□ 0.4
SLC47A1Q96FL8 MTMR9LP-203ENST00000426597 1545 ntBASIC17.53■□□□□ 0.4
SLC47A1Q96FL8 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC47A1Q96FL8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC47A1Q96FL8 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SLC47A1Q96FL8 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SLC47A1Q96FL8 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC47A1Q96FL8 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC47A1Q96FL8 GNAS-203ENST00000306120 1878 ntBASIC17.53■□□□□ 0.4
SLC47A1Q96FL8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SLC47A1Q96FL8 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
SLC47A1Q96FL8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.53■□□□□ 0.4
SLC47A1Q96FL8 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC47A1Q96FL8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.53■□□□□ 0.4
SLC47A1Q96FL8 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC47A1Q96FL8 AL160286.2-201ENST00000567150 934 ntBASIC17.53■□□□□ 0.4
SLC47A1Q96FL8 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SLC47A1Q96FL8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.53■□□□□ 0.4
SLC47A1Q96FL8 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC47A1Q96FL8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC47A1Q96FL8 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC47A1Q96FL8 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC47A1Q96FL8 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC47A1Q96FL8 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC47A1Q96FL8 RCC2P6-201ENST00000526625 1557 ntBASIC17.53■□□□□ 0.4
SLC47A1Q96FL8 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SLC47A1Q96FL8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC47A1Q96FL8 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC47A1Q96FL8 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC47A1Q96FL8 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC47A1Q96FL8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC47A1Q96FL8 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC47A1Q96FL8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC47A1Q96FL8 AC134043.2-201ENST00000624206 2238 ntBASIC17.52■□□□□ 0.4
SLC47A1Q96FL8 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SLC47A1Q96FL8 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.52■□□□□ 0.4
SLC47A1Q96FL8 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SLC47A1Q96FL8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC47A1Q96FL8 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC47A1Q96FL8 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.52■□□□□ 0.4
SLC47A1Q96FL8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC47A1Q96FL8 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SLC47A1Q96FL8 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC47A1Q96FL8 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.52■□□□□ 0.4
SLC47A1Q96FL8 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.52■□□□□ 0.4
SLC47A1Q96FL8 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.52■□□□□ 0.4
SLC47A1Q96FL8 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC47A1Q96FL8 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.52■□□□□ 0.4
SLC47A1Q96FL8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.52■□□□□ 0.4
SLC47A1Q96FL8 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.52■□□□□ 0.4
SLC47A1Q96FL8 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.52■□□□□ 0.4
SLC47A1Q96FL8 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.52■□□□□ 0.4
SLC47A1Q96FL8 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.52■□□□□ 0.4
SLC47A1Q96FL8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.52■□□□□ 0.4
SLC47A1Q96FL8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
SLC47A1Q96FL8 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms