Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 AC004264.1-201ENST00000608354 794 ntBASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 ESPNP-201ENST00000270691 2015 ntBASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 AC233702.5-201ENST00000584107 538 ntBASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40AQ8WXH6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 AC126763.1-201ENST00000552015 2118 ntBASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 MIR4497-201ENST00000583208 89 ntBASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40AQ8WXH6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAB40AQ8WXH6 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.21
RAB40AQ8WXH6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAB40AQ8WXH6 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.33■□□□□ 0.21
RAB40AQ8WXH6 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.33■□□□□ 0.21
RAB40AQ8WXH6 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAB40AQ8WXH6 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
RAB40AQ8WXH6 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAB40AQ8WXH6 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40AQ8WXH6 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40AQ8WXH6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RAB40AQ8WXH6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40AQ8WXH6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RAB40AQ8WXH6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB40AQ8WXH6 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.33■□□□□ 0.2
RAB40AQ8WXH6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB40AQ8WXH6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RAB40AQ8WXH6 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms