Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.81■□□□□ 0.6
PTCD2Q8WV60 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTCD2Q8WV60 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTCD2Q8WV60 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PTCD2Q8WV60 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.81■□□□□ 0.6
PTCD2Q8WV60 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.81■□□□□ 0.6
PTCD2Q8WV60 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.81■□□□□ 0.6
PTCD2Q8WV60 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.81■□□□□ 0.6
PTCD2Q8WV60 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.81■□□□□ 0.6
PTCD2Q8WV60 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
PTCD2Q8WV60 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTCD2Q8WV60 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTCD2Q8WV60 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTCD2Q8WV60 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.81■□□□□ 0.6
PTCD2Q8WV60 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTCD2Q8WV60 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PTCD2Q8WV60 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTCD2Q8WV60 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTCD2Q8WV60 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PTCD2Q8WV60 AL162741.1-201ENST00000565563 1558 ntBASIC18.81■□□□□ 0.6
PTCD2Q8WV60 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTCD2Q8WV60 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.81■□□□□ 0.6
PTCD2Q8WV60 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTCD2Q8WV60 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTCD2Q8WV60 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
PTCD2Q8WV60 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTCD2Q8WV60 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTCD2Q8WV60 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTCD2Q8WV60 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTCD2Q8WV60 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.8■□□□□ 0.6
PTCD2Q8WV60 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTCD2Q8WV60 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.8■□□□□ 0.6
PTCD2Q8WV60 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.8■□□□□ 0.6
PTCD2Q8WV60 SLC25A1P2-201ENST00000430693 912 ntBASIC18.8■□□□□ 0.6
PTCD2Q8WV60 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.8■□□□□ 0.6
PTCD2Q8WV60 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
PTCD2Q8WV60 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PTCD2Q8WV60 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.8■□□□□ 0.6
PTCD2Q8WV60 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTCD2Q8WV60 AC126763.1-201ENST00000552015 2118 ntBASIC18.8■□□□□ 0.6
PTCD2Q8WV60 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTCD2Q8WV60 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.79■□□□□ 0.6
PTCD2Q8WV60 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.79■□□□□ 0.6
PTCD2Q8WV60 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTCD2Q8WV60 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCD2Q8WV60 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.79■□□□□ 0.6
PTCD2Q8WV60 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCD2Q8WV60 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTCD2Q8WV60 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCD2Q8WV60 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTCD2Q8WV60 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.79■□□□□ 0.6
PTCD2Q8WV60 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.79■□□□□ 0.6
PTCD2Q8WV60 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCD2Q8WV60 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCD2Q8WV60 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.79■□□□□ 0.6
PTCD2Q8WV60 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.79■□□□□ 0.6
PTCD2Q8WV60 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCD2Q8WV60 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.79■□□□□ 0.6
PTCD2Q8WV60 AC104076.2-201ENST00000448912 469 ntBASIC18.79■□□□□ 0.6
PTCD2Q8WV60 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC18.79■□□□□ 0.6
PTCD2Q8WV60 AC116562.4-202ENST00000641738 218 ntBASIC18.79■□□□□ 0.6
PTCD2Q8WV60 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCD2Q8WV60 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCD2Q8WV60 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCD2Q8WV60 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTCD2Q8WV60 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTCD2Q8WV60 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
PTCD2Q8WV60 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.79■□□□□ 0.6
PTCD2Q8WV60 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCD2Q8WV60 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCD2Q8WV60 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCD2Q8WV60 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTCD2Q8WV60 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PTCD2Q8WV60 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTCD2Q8WV60 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.78■□□□□ 0.6
PTCD2Q8WV60 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTCD2Q8WV60 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
PTCD2Q8WV60 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTCD2Q8WV60 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTCD2Q8WV60 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PTCD2Q8WV60 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.78■□□□□ 0.6
PTCD2Q8WV60 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.78■□□□□ 0.6
PTCD2Q8WV60 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTCD2Q8WV60 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.78■□□□□ 0.6
PTCD2Q8WV60 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.78■□□□□ 0.6
PTCD2Q8WV60 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.78■□□□□ 0.6
PTCD2Q8WV60 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTCD2Q8WV60 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTCD2Q8WV60 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTCD2Q8WV60 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.78■□□□□ 0.6
PTCD2Q8WV60 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
PTCD2Q8WV60 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
PTCD2Q8WV60 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTCD2Q8WV60 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTCD2Q8WV60 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.78■□□□□ 0.6
PTCD2Q8WV60 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PTCD2Q8WV60 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTCD2Q8WV60 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTCD2Q8WV60 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTCD2Q8WV60 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms