Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 KRT8P50-201ENST00000562022 1438 ntBASIC19.18■□□□□ 0.66
PCDH19Q8TAB3 AL354751.1-201ENST00000412768 1863 ntBASIC19.18■□□□□ 0.66
PCDH19Q8TAB3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH19Q8TAB3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH19Q8TAB3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
PCDH19Q8TAB3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH19Q8TAB3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH19Q8TAB3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.18■□□□□ 0.66
PCDH19Q8TAB3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH19Q8TAB3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDH19Q8TAB3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PCDH19Q8TAB3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDH19Q8TAB3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH19Q8TAB3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
PCDH19Q8TAB3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDH19Q8TAB3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH19Q8TAB3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH19Q8TAB3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
PCDH19Q8TAB3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH19Q8TAB3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH19Q8TAB3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH19Q8TAB3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDH19Q8TAB3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH19Q8TAB3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH19Q8TAB3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDH19Q8TAB3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDH19Q8TAB3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH19Q8TAB3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH19Q8TAB3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH19Q8TAB3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDH19Q8TAB3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDH19Q8TAB3 EGLN1P1-201ENST00000531623 762 ntBASIC19.17■□□□□ 0.66
PCDH19Q8TAB3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.17■□□□□ 0.66
PCDH19Q8TAB3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDH19Q8TAB3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDH19Q8TAB3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH19Q8TAB3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH19Q8TAB3 AL390961.4-201ENST00000623958 2535 ntBASIC19.17■□□□□ 0.66
PCDH19Q8TAB3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDH19Q8TAB3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH19Q8TAB3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH19Q8TAB3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PCDH19Q8TAB3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH19Q8TAB3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDH19Q8TAB3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
PCDH19Q8TAB3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH19Q8TAB3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH19Q8TAB3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH19Q8TAB3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PCDH19Q8TAB3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH19Q8TAB3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PCDH19Q8TAB3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PCDH19Q8TAB3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PCDH19Q8TAB3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PCDH19Q8TAB3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDH19Q8TAB3 WWOX-216ENST00000569818 525 ntBASIC19.16■□□□□ 0.66
PCDH19Q8TAB3 AC145285.6-201ENST00000604632 637 ntBASIC19.16■□□□□ 0.66
PCDH19Q8TAB3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PCDH19Q8TAB3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PCDH19Q8TAB3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.16■□□□□ 0.66
PCDH19Q8TAB3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PCDH19Q8TAB3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.16■□□□□ 0.66
PCDH19Q8TAB3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH19Q8TAB3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH19Q8TAB3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH19Q8TAB3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PCDH19Q8TAB3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH19Q8TAB3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH19Q8TAB3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH19Q8TAB3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH19Q8TAB3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDH19Q8TAB3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH19Q8TAB3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH19Q8TAB3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PCDH19Q8TAB3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDH19Q8TAB3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH19Q8TAB3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH19Q8TAB3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDH19Q8TAB3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH19Q8TAB3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDH19Q8TAB3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH19Q8TAB3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDH19Q8TAB3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH19Q8TAB3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDH19Q8TAB3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDH19Q8TAB3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH19Q8TAB3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH19Q8TAB3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDH19Q8TAB3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.15■□□□□ 0.66
PCDH19Q8TAB3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
PCDH19Q8TAB3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDH19Q8TAB3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
PCDH19Q8TAB3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
PCDH19Q8TAB3 AC010653.2-201ENST00000623505 997 ntBASIC19.15■□□□□ 0.66
PCDH19Q8TAB3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDH19Q8TAB3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH19Q8TAB3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH19Q8TAB3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDH19Q8TAB3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDH19Q8TAB3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms