Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPEB3Q8NE35 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPEB3Q8NE35 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.25■□□□□ 0.19
CPEB3Q8NE35 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPEB3Q8NE35 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.25■□□□□ 0.19
CPEB3Q8NE35 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.25■□□□□ 0.19
CPEB3Q8NE35 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.25■□□□□ 0.19
CPEB3Q8NE35 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.25■□□□□ 0.19
CPEB3Q8NE35 AC012306.2-201ENST00000609350 630 ntBASIC16.25■□□□□ 0.19
CPEB3Q8NE35 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.25■□□□□ 0.19
CPEB3Q8NE35 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CPEB3Q8NE35 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.25■□□□□ 0.19
CPEB3Q8NE35 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPEB3Q8NE35 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.25■□□□□ 0.19
CPEB3Q8NE35 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPEB3Q8NE35 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.25■□□□□ 0.19
CPEB3Q8NE35 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.25■□□□□ 0.19
CPEB3Q8NE35 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPEB3Q8NE35 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPEB3Q8NE35 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CPEB3Q8NE35 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPEB3Q8NE35 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPEB3Q8NE35 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPEB3Q8NE35 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CPEB3Q8NE35 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CPEB3Q8NE35 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPEB3Q8NE35 AC211429.1-201ENST00000415277 523 ntBASIC16.24■□□□□ 0.19
CPEB3Q8NE35 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CPEB3Q8NE35 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.24■□□□□ 0.19
CPEB3Q8NE35 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.24■□□□□ 0.19
CPEB3Q8NE35 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CPEB3Q8NE35 AC097493.4-201ENST00000641197 219 ntBASIC16.24■□□□□ 0.19
CPEB3Q8NE35 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPEB3Q8NE35 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CPEB3Q8NE35 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.24■□□□□ 0.19
CPEB3Q8NE35 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
CPEB3Q8NE35 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPEB3Q8NE35 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.24■□□□□ 0.19
CPEB3Q8NE35 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPEB3Q8NE35 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.24■□□□□ 0.19
CPEB3Q8NE35 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPEB3Q8NE35 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 HMGA1P5-201ENST00000412453 271 ntBASIC16.23■□□□□ 0.19
CPEB3Q8NE35 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 WWOX-216ENST00000569818 525 ntBASIC16.23■□□□□ 0.19
CPEB3Q8NE35 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPEB3Q8NE35 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.22■□□□□ 0.19
CPEB3Q8NE35 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPEB3Q8NE35 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CPEB3Q8NE35 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CPEB3Q8NE35 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPEB3Q8NE35 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPEB3Q8NE35 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPEB3Q8NE35 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPEB3Q8NE35 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPEB3Q8NE35 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CPEB3Q8NE35 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPEB3Q8NE35 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPEB3Q8NE35 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.22■□□□□ 0.19
CPEB3Q8NE35 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.22■□□□□ 0.19
CPEB3Q8NE35 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CPEB3Q8NE35 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPEB3Q8NE35 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPEB3Q8NE35 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.22■□□□□ 0.19
CPEB3Q8NE35 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms