Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.07■□□□□ 0.32
SETD9Q8NE22 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SETD9Q8NE22 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SETD9Q8NE22 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.07■□□□□ 0.32
SETD9Q8NE22 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SETD9Q8NE22 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
SETD9Q8NE22 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SETD9Q8NE22 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
SETD9Q8NE22 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SETD9Q8NE22 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.06■□□□□ 0.32
SETD9Q8NE22 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SETD9Q8NE22 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.06■□□□□ 0.32
SETD9Q8NE22 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SETD9Q8NE22 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SETD9Q8NE22 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SETD9Q8NE22 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SETD9Q8NE22 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SETD9Q8NE22 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.06■□□□□ 0.32
SETD9Q8NE22 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SETD9Q8NE22 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.06■□□□□ 0.32
SETD9Q8NE22 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SETD9Q8NE22 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.06■□□□□ 0.32
SETD9Q8NE22 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SETD9Q8NE22 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SETD9Q8NE22 AC137761.2-201ENST00000561729 223 ntBASIC17.06■□□□□ 0.32
SETD9Q8NE22 AC145350.3-201ENST00000569033 163 ntBASIC17.06■□□□□ 0.32
SETD9Q8NE22 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.06■□□□□ 0.32
SETD9Q8NE22 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.06■□□□□ 0.32
SETD9Q8NE22 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.06■□□□□ 0.32
SETD9Q8NE22 AC068587.9-201ENST00000641814 219 ntBASIC17.06■□□□□ 0.32
SETD9Q8NE22 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SETD9Q8NE22 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SETD9Q8NE22 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SETD9Q8NE22 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SETD9Q8NE22 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SETD9Q8NE22 PCDHA12-202ENST00000613593 2588 ntBASIC17.06■□□□□ 0.32
SETD9Q8NE22 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SETD9Q8NE22 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SETD9Q8NE22 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SETD9Q8NE22 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SETD9Q8NE22 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SETD9Q8NE22 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SETD9Q8NE22 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SETD9Q8NE22 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SETD9Q8NE22 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SETD9Q8NE22 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SETD9Q8NE22 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SETD9Q8NE22 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SETD9Q8NE22 KRT8P45-201ENST00000414328 1447 ntBASIC17.05■□□□□ 0.32
SETD9Q8NE22 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.05■□□□□ 0.32
SETD9Q8NE22 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
SETD9Q8NE22 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SETD9Q8NE22 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SETD9Q8NE22 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SETD9Q8NE22 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SETD9Q8NE22 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SETD9Q8NE22 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.05■□□□□ 0.32
SETD9Q8NE22 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SETD9Q8NE22 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SETD9Q8NE22 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SETD9Q8NE22 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SETD9Q8NE22 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.05■□□□□ 0.32
SETD9Q8NE22 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.05■□□□□ 0.32
SETD9Q8NE22 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
SETD9Q8NE22 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.05■□□□□ 0.32
SETD9Q8NE22 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SETD9Q8NE22 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SETD9Q8NE22 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SETD9Q8NE22 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
SETD9Q8NE22 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SETD9Q8NE22 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SETD9Q8NE22 AC141586.5-201ENST00000624546 2050 ntBASIC17.05■□□□□ 0.32
SETD9Q8NE22 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.04■□□□□ 0.32
SETD9Q8NE22 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.04■□□□□ 0.32
SETD9Q8NE22 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
SETD9Q8NE22 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SETD9Q8NE22 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SETD9Q8NE22 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
SETD9Q8NE22 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
SETD9Q8NE22 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SETD9Q8NE22 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SETD9Q8NE22 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SETD9Q8NE22 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.04■□□□□ 0.32
SETD9Q8NE22 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SETD9Q8NE22 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.04■□□□□ 0.32
SETD9Q8NE22 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SETD9Q8NE22 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SETD9Q8NE22 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SETD9Q8NE22 AC231657.2-201ENST00000624556 255 ntBASIC17.04■□□□□ 0.32
SETD9Q8NE22 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.04■□□□□ 0.32
SETD9Q8NE22 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
SETD9Q8NE22 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SETD9Q8NE22 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SETD9Q8NE22 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SETD9Q8NE22 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.04■□□□□ 0.32
SETD9Q8NE22 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SETD9Q8NE22 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SETD9Q8NE22 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SETD9Q8NE22 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SETD9Q8NE22 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms