Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNPOQ8N3V7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.86■□□□□ 0.61
SYNPOQ8N3V7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNPOQ8N3V7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SYNPOQ8N3V7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.86■□□□□ 0.61
SYNPOQ8N3V7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.86■□□□□ 0.61
SYNPOQ8N3V7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNPOQ8N3V7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.86■□□□□ 0.61
SYNPOQ8N3V7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNPOQ8N3V7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNPOQ8N3V7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.86■□□□□ 0.61
SYNPOQ8N3V7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.86■□□□□ 0.61
SYNPOQ8N3V7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SYNPOQ8N3V7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.86■□□□□ 0.61
SYNPOQ8N3V7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.86■□□□□ 0.61
SYNPOQ8N3V7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
SYNPOQ8N3V7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.86■□□□□ 0.61
SYNPOQ8N3V7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.86■□□□□ 0.61
SYNPOQ8N3V7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.86■□□□□ 0.61
SYNPOQ8N3V7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.86■□□□□ 0.61
SYNPOQ8N3V7 AC023511.2-201ENST00000618803 211 ntBASIC18.86■□□□□ 0.61
SYNPOQ8N3V7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNPOQ8N3V7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.86■□□□□ 0.61
SYNPOQ8N3V7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNPOQ8N3V7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SYNPOQ8N3V7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNPOQ8N3V7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNPOQ8N3V7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNPOQ8N3V7 AC034236.2-201ENST00000606662 1610 ntBASIC18.85■□□□□ 0.61
SYNPOQ8N3V7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SYNPOQ8N3V7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNPOQ8N3V7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SYNPOQ8N3V7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNPOQ8N3V7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.85■□□□□ 0.61
SYNPOQ8N3V7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNPOQ8N3V7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SYNPOQ8N3V7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNPOQ8N3V7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNPOQ8N3V7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.85■□□□□ 0.61
SYNPOQ8N3V7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNPOQ8N3V7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
SYNPOQ8N3V7 VENTXP7-201ENST00000475503 772 ntBASIC18.85■□□□□ 0.61
SYNPOQ8N3V7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SYNPOQ8N3V7 AC006538.3-201ENST00000612495 578 ntBASIC18.85■□□□□ 0.61
SYNPOQ8N3V7 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SYNPOQ8N3V7 AC004263.2-201ENST00000617183 678 ntBASIC18.85■□□□□ 0.61
SYNPOQ8N3V7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SYNPOQ8N3V7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNPOQ8N3V7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNPOQ8N3V7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNPOQ8N3V7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNPOQ8N3V7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SYNPOQ8N3V7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SYNPOQ8N3V7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.84■□□□□ 0.61
SYNPOQ8N3V7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNPOQ8N3V7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SYNPOQ8N3V7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SYNPOQ8N3V7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.84■□□□□ 0.61
SYNPOQ8N3V7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNPOQ8N3V7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.84■□□□□ 0.61
SYNPOQ8N3V7 IGHGP-201ENST00000390555 1178 ntBASIC18.84■□□□□ 0.61
SYNPOQ8N3V7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNPOQ8N3V7 IGHV3-47-201ENST00000425060 335 ntBASIC18.84■□□□□ 0.61
SYNPOQ8N3V7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.84■□□□□ 0.61
SYNPOQ8N3V7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.84■□□□□ 0.61
SYNPOQ8N3V7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.84■□□□□ 0.61
SYNPOQ8N3V7 AC009065.1-201ENST00000564055 1225 ntBASIC18.84■□□□□ 0.61
SYNPOQ8N3V7 AC138894.3-201ENST00000603787 634 ntBASIC18.84■□□□□ 0.61
SYNPOQ8N3V7 AC064862.7-201ENST00000604520 867 ntBASIC18.84■□□□□ 0.61
SYNPOQ8N3V7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SYNPOQ8N3V7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
SYNPOQ8N3V7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SYNPOQ8N3V7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.84■□□□□ 0.61
SYNPOQ8N3V7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.84■□□□□ 0.61
SYNPOQ8N3V7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.84■□□□□ 0.61
SYNPOQ8N3V7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SYNPOQ8N3V7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNPOQ8N3V7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNPOQ8N3V7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.84■□□□□ 0.61
SYNPOQ8N3V7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNPOQ8N3V7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNPOQ8N3V7 Z82202.1-201ENST00000623446 1880 ntBASIC18.84■□□□□ 0.61
SYNPOQ8N3V7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNPOQ8N3V7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
SYNPOQ8N3V7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
SYNPOQ8N3V7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
SYNPOQ8N3V7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
SYNPOQ8N3V7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SYNPOQ8N3V7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SYNPOQ8N3V7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SYNPOQ8N3V7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SYNPOQ8N3V7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SYNPOQ8N3V7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.83■□□□□ 0.6
SYNPOQ8N3V7 KRT16P4-201ENST00000453883 522 ntBASIC18.83■□□□□ 0.6
SYNPOQ8N3V7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
SYNPOQ8N3V7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SYNPOQ8N3V7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
SYNPOQ8N3V7 AC099336.1-202ENST00000602961 463 ntBASIC18.83■□□□□ 0.6
SYNPOQ8N3V7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.83■□□□□ 0.6
SYNPOQ8N3V7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms