Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
ARHGEF28Q8N1W1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
ARHGEF28Q8N1W1 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
ARHGEF28Q8N1W1 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC25.69■■□□□ 1.7
ARHGEF28Q8N1W1 ABR-217ENST00000572441 563 ntTSL 4 BASIC25.69■■□□□ 1.7
ARHGEF28Q8N1W1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC25.69■■□□□ 1.7
ARHGEF28Q8N1W1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
ARHGEF28Q8N1W1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
ARHGEF28Q8N1W1 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ARHGEF28Q8N1W1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ARHGEF28Q8N1W1 AL499627.1-201ENST00000569373 2188 ntBASIC25.69■■□□□ 1.7
ARHGEF28Q8N1W1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
ARHGEF28Q8N1W1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC25.69■■□□□ 1.7
ARHGEF28Q8N1W1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ARHGEF28Q8N1W1 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ARHGEF28Q8N1W1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ARHGEF28Q8N1W1 DDT-203ENST00000403754 569 ntTSL 3 BASIC25.68■■□□□ 1.7
ARHGEF28Q8N1W1 DDT-206ENST00000430101 573 ntTSL 2 BASIC25.68■■□□□ 1.7
ARHGEF28Q8N1W1 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC25.68■■□□□ 1.7
ARHGEF28Q8N1W1 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC25.68■■□□□ 1.7
ARHGEF28Q8N1W1 AL121772.3-201ENST00000610840 674 ntBASIC25.68■■□□□ 1.7
ARHGEF28Q8N1W1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
ARHGEF28Q8N1W1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
ARHGEF28Q8N1W1 AC009102.3-201ENST00000623118 1491 ntBASIC25.68■■□□□ 1.7
ARHGEF28Q8N1W1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
ARHGEF28Q8N1W1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC25.68■■□□□ 1.7
ARHGEF28Q8N1W1 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ARHGEF28Q8N1W1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC25.68■■□□□ 1.7
ARHGEF28Q8N1W1 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC25.68■■□□□ 1.7
ARHGEF28Q8N1W1 FICD-205ENST00000552758 603 ntTSL 2 BASIC25.68■■□□□ 1.7
ARHGEF28Q8N1W1 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
ARHGEF28Q8N1W1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC25.68■■□□□ 1.7
ARHGEF28Q8N1W1 AL671883.3-201ENST00000603274 991 ntBASIC25.68■■□□□ 1.7
ARHGEF28Q8N1W1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ARHGEF28Q8N1W1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC25.68■■□□□ 1.7
ARHGEF28Q8N1W1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
ARHGEF28Q8N1W1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ARHGEF28Q8N1W1 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ARHGEF28Q8N1W1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC25.67■■□□□ 1.7
ARHGEF28Q8N1W1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ARHGEF28Q8N1W1 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC25.67■■□□□ 1.7
ARHGEF28Q8N1W1 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ARHGEF28Q8N1W1 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC25.67■■□□□ 1.7
ARHGEF28Q8N1W1 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC25.67■■□□□ 1.7
ARHGEF28Q8N1W1 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC25.67■■□□□ 1.7
ARHGEF28Q8N1W1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
ARHGEF28Q8N1W1 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC25.67■■□□□ 1.7
ARHGEF28Q8N1W1 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC25.67■■□□□ 1.7
ARHGEF28Q8N1W1 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC25.66■■□□□ 1.7
ARHGEF28Q8N1W1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ARHGEF28Q8N1W1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ARHGEF28Q8N1W1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ARHGEF28Q8N1W1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
ARHGEF28Q8N1W1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC25.66■■□□□ 1.7
ARHGEF28Q8N1W1 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC25.66■■□□□ 1.7
ARHGEF28Q8N1W1 AL160237.2-201ENST00000556165 472 ntBASIC25.66■■□□□ 1.7
ARHGEF28Q8N1W1 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ARHGEF28Q8N1W1 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
ARHGEF28Q8N1W1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ARHGEF28Q8N1W1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC25.66■■□□□ 1.7
ARHGEF28Q8N1W1 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ARHGEF28Q8N1W1 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
ARHGEF28Q8N1W1 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ARHGEF28Q8N1W1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ARHGEF28Q8N1W1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC25.66■■□□□ 1.7
ARHGEF28Q8N1W1 SDHAP2-201ENST00000455183 2001 ntBASIC25.66■■□□□ 1.7
ARHGEF28Q8N1W1 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ARHGEF28Q8N1W1 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC25.66■■□□□ 1.7
ARHGEF28Q8N1W1 RNA5SP419-201ENST00000515908 135 ntBASIC25.66■■□□□ 1.7
ARHGEF28Q8N1W1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ARHGEF28Q8N1W1 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC25.66■■□□□ 1.7
ARHGEF28Q8N1W1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ARHGEF28Q8N1W1 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ARHGEF28Q8N1W1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC25.65■■□□□ 1.7
ARHGEF28Q8N1W1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ARHGEF28Q8N1W1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
ARHGEF28Q8N1W1 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC25.65■■□□□ 1.7
ARHGEF28Q8N1W1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ARHGEF28Q8N1W1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC25.65■■□□□ 1.7
ARHGEF28Q8N1W1 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
ARHGEF28Q8N1W1 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ARHGEF28Q8N1W1 EMD-201ENST00000369835 966 ntTSL 3 BASIC25.65■■□□□ 1.7
ARHGEF28Q8N1W1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
ARHGEF28Q8N1W1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC25.65■■□□□ 1.7
ARHGEF28Q8N1W1 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC25.65■■□□□ 1.7
ARHGEF28Q8N1W1 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ARHGEF28Q8N1W1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC25.65■■□□□ 1.7
ARHGEF28Q8N1W1 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC25.65■■□□□ 1.7
ARHGEF28Q8N1W1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ARHGEF28Q8N1W1 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ARHGEF28Q8N1W1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
ARHGEF28Q8N1W1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC25.64■■□□□ 1.7
ARHGEF28Q8N1W1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
ARHGEF28Q8N1W1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
ARHGEF28Q8N1W1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC25.64■■□□□ 1.7
ARHGEF28Q8N1W1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC25.64■■□□□ 1.7
ARHGEF28Q8N1W1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC25.64■■□□□ 1.7
ARHGEF28Q8N1W1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
ARHGEF28Q8N1W1 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC25.64■■□□□ 1.7
ARHGEF28Q8N1W1 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC25.64■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms