Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 KRT17P3-201ENST00000420566 1262 ntBASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 UNC93B5-201ENST00000530315 699 ntBASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 WT1-AS_3.1-201ENST00000613262 234 ntBASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 ESPNP-201ENST00000270691 2015 ntBASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 MNT-208ENST00000575394 606 ntTSL 4 BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 MTDHP1-201ENST00000605323 784 ntBASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 POR-209ENST00000439269 1858 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LINC01561Q8N1V8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 TNRC18P3-201ENST00000441896 2691 ntBASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
LINC01561Q8N1V8 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms