Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CCDC50Q8IVM0 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC50Q8IVM0 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC50Q8IVM0 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CCDC50Q8IVM0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC50Q8IVM0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC50Q8IVM0 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC50Q8IVM0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC50Q8IVM0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC50Q8IVM0 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CCDC50Q8IVM0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CCDC50Q8IVM0 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC50Q8IVM0 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CCDC50Q8IVM0 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC50Q8IVM0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC50Q8IVM0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC50Q8IVM0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC50Q8IVM0 KSR1P1-201ENST00000446298 240 ntBASIC19.62■□□□□ 0.73
CCDC50Q8IVM0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC50Q8IVM0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC50Q8IVM0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC50Q8IVM0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
CCDC50Q8IVM0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC50Q8IVM0 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC50Q8IVM0 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC50Q8IVM0 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC50Q8IVM0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC50Q8IVM0 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CCDC50Q8IVM0 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC50Q8IVM0 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC50Q8IVM0 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC50Q8IVM0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 KRT16P1-201ENST00000399124 1418 ntBASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 BICD1-207ENST00000551848 1962 ntBASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 AL353807.1-201ENST00000427475 662 ntBASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 AC091390.4-202ENST00000476426 537 ntBASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 AL353708.3-201ENST00000610272 989 ntBASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 CR392000.1-201ENST00000624770 1228 ntBASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC50Q8IVM0 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC50Q8IVM0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC50Q8IVM0 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC50Q8IVM0 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCDC50Q8IVM0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCDC50Q8IVM0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC50Q8IVM0 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC50Q8IVM0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCDC50Q8IVM0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC50Q8IVM0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC50Q8IVM0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC50Q8IVM0 AC004951.3-201ENST00000418645 1148 ntBASIC19.6■□□□□ 0.73
CCDC50Q8IVM0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.6■□□□□ 0.73
CCDC50Q8IVM0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC50Q8IVM0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC50Q8IVM0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC50Q8IVM0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC50Q8IVM0 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CCDC50Q8IVM0 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC50Q8IVM0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC50Q8IVM0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
CCDC50Q8IVM0 AL499627.1-201ENST00000569373 2188 ntBASIC19.6■□□□□ 0.73
CCDC50Q8IVM0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC50Q8IVM0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC50Q8IVM0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC50Q8IVM0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC50Q8IVM0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC50Q8IVM0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC50Q8IVM0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC50Q8IVM0 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CCDC50Q8IVM0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC50Q8IVM0 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC50Q8IVM0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC50Q8IVM0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms