Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RAB43Q86YS6 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB43Q86YS6 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB43Q86YS6 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB43Q86YS6 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
RAB43Q86YS6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB43Q86YS6 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB43Q86YS6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB43Q86YS6 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RAB43Q86YS6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB43Q86YS6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB43Q86YS6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.73■□□□□ 0.43
RAB43Q86YS6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RAB43Q86YS6 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.73■□□□□ 0.43
RAB43Q86YS6 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB43Q86YS6 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB43Q86YS6 PCED1CP-201ENST00000419887 785 ntBASIC17.73■□□□□ 0.43
RAB43Q86YS6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.73■□□□□ 0.43
RAB43Q86YS6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB43Q86YS6 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB43Q86YS6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB43Q86YS6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB43Q86YS6 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB43Q86YS6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB43Q86YS6 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB43Q86YS6 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB43Q86YS6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB43Q86YS6 AL049812.1-201ENST00000432563 2267 ntBASIC17.73■□□□□ 0.43
RAB43Q86YS6 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
RAB43Q86YS6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RAB43Q86YS6 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB43Q86YS6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
RAB43Q86YS6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.72■□□□□ 0.43
RAB43Q86YS6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.72■□□□□ 0.43
RAB43Q86YS6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB43Q86YS6 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB43Q86YS6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB43Q86YS6 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB43Q86YS6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB43Q86YS6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
RAB43Q86YS6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB43Q86YS6 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB43Q86YS6 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB43Q86YS6 IER3-202ENST00000376377 1350 ntBASIC17.72■□□□□ 0.43
RAB43Q86YS6 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB43Q86YS6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB43Q86YS6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.72■□□□□ 0.43
RAB43Q86YS6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB43Q86YS6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB43Q86YS6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.72■□□□□ 0.43
RAB43Q86YS6 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.72■□□□□ 0.43
RAB43Q86YS6 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
RAB43Q86YS6 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.72■□□□□ 0.43
RAB43Q86YS6 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB43Q86YS6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB43Q86YS6 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB43Q86YS6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB43Q86YS6 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
RAB43Q86YS6 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RAB43Q86YS6 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RAB43Q86YS6 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB43Q86YS6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RAB43Q86YS6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB43Q86YS6 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RAB43Q86YS6 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB43Q86YS6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB43Q86YS6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB43Q86YS6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB43Q86YS6 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.71■□□□□ 0.43
RAB43Q86YS6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB43Q86YS6 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB43Q86YS6 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB43Q86YS6 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB43Q86YS6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB43Q86YS6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB43Q86YS6 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB43Q86YS6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.71■□□□□ 0.43
RAB43Q86YS6 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.71■□□□□ 0.43
RAB43Q86YS6 FAM86EP-206ENST00000510506 987 ntBASIC17.71■□□□□ 0.43
RAB43Q86YS6 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB43Q86YS6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB43Q86YS6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB43Q86YS6 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB43Q86YS6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
RAB43Q86YS6 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB43Q86YS6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB43Q86YS6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RAB43Q86YS6 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.71■□□□□ 0.43
RAB43Q86YS6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.71■□□□□ 0.43
RAB43Q86YS6 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB43Q86YS6 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RAB43Q86YS6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RAB43Q86YS6 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB43Q86YS6 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB43Q86YS6 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RAB43Q86YS6 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB43Q86YS6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB43Q86YS6 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB43Q86YS6 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB43Q86YS6 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms