Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
UBE3BQ7Z3V4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC23.13■■□□□ 1.29
UBE3BQ7Z3V4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
UBE3BQ7Z3V4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
UBE3BQ7Z3V4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
UBE3BQ7Z3V4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
UBE3BQ7Z3V4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC23.13■■□□□ 1.29
UBE3BQ7Z3V4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
UBE3BQ7Z3V4 KRT18P48-201ENST00000434763 852 ntBASIC23.13■■□□□ 1.29
UBE3BQ7Z3V4 AP002383.4-201ENST00000442518 975 ntBASIC23.13■■□□□ 1.29
UBE3BQ7Z3V4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC23.13■■□□□ 1.29
UBE3BQ7Z3V4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC23.13■■□□□ 1.29
UBE3BQ7Z3V4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC23.13■■□□□ 1.29
UBE3BQ7Z3V4 CLEC4GP1-201ENST00000596555 870 ntBASIC23.13■■□□□ 1.29
UBE3BQ7Z3V4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC23.13■■□□□ 1.29
UBE3BQ7Z3V4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC23.13■■□□□ 1.29
UBE3BQ7Z3V4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC23.13■■□□□ 1.29
UBE3BQ7Z3V4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
UBE3BQ7Z3V4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
UBE3BQ7Z3V4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
UBE3BQ7Z3V4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
UBE3BQ7Z3V4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC23.13■■□□□ 1.29
UBE3BQ7Z3V4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
UBE3BQ7Z3V4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
UBE3BQ7Z3V4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
UBE3BQ7Z3V4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
UBE3BQ7Z3V4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC23.13■■□□□ 1.29
UBE3BQ7Z3V4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
UBE3BQ7Z3V4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
UBE3BQ7Z3V4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
UBE3BQ7Z3V4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
UBE3BQ7Z3V4 Z83836.1-201ENST00000624605 1642 ntBASIC23.12■■□□□ 1.29
UBE3BQ7Z3V4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC23.12■■□□□ 1.29
UBE3BQ7Z3V4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
UBE3BQ7Z3V4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
UBE3BQ7Z3V4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
UBE3BQ7Z3V4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
UBE3BQ7Z3V4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
UBE3BQ7Z3V4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC23.12■■□□□ 1.29
UBE3BQ7Z3V4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
UBE3BQ7Z3V4 AP000593.1-201ENST00000393668 712 ntBASIC23.12■■□□□ 1.29
UBE3BQ7Z3V4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
UBE3BQ7Z3V4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
UBE3BQ7Z3V4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC23.12■■□□□ 1.29
UBE3BQ7Z3V4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC23.12■■□□□ 1.29
UBE3BQ7Z3V4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC23.12■■□□□ 1.29
UBE3BQ7Z3V4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC23.12■■□□□ 1.29
UBE3BQ7Z3V4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
UBE3BQ7Z3V4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC23.12■■□□□ 1.29
UBE3BQ7Z3V4 MIR3180-1-201ENST00000580374 94 ntBASIC23.12■■□□□ 1.29
UBE3BQ7Z3V4 MIR3180-3-201ENST00000584616 94 ntBASIC23.12■■□□□ 1.29
UBE3BQ7Z3V4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
UBE3BQ7Z3V4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC23.12■■□□□ 1.29
UBE3BQ7Z3V4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC23.12■■□□□ 1.29
UBE3BQ7Z3V4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
UBE3BQ7Z3V4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
UBE3BQ7Z3V4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
UBE3BQ7Z3V4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
UBE3BQ7Z3V4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
UBE3BQ7Z3V4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC23.12■■□□□ 1.29
UBE3BQ7Z3V4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC23.11■■□□□ 1.29
UBE3BQ7Z3V4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC23.11■■□□□ 1.29
UBE3BQ7Z3V4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC23.11■■□□□ 1.29
UBE3BQ7Z3V4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
UBE3BQ7Z3V4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
UBE3BQ7Z3V4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC23.11■■□□□ 1.29
UBE3BQ7Z3V4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
UBE3BQ7Z3V4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
UBE3BQ7Z3V4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
UBE3BQ7Z3V4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
UBE3BQ7Z3V4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC23.11■■□□□ 1.29
UBE3BQ7Z3V4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC23.11■■□□□ 1.29
UBE3BQ7Z3V4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC23.11■■□□□ 1.29
UBE3BQ7Z3V4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC23.11■■□□□ 1.29
UBE3BQ7Z3V4 AP003733.1-201ENST00000491725 852 ntBASIC23.11■■□□□ 1.29
UBE3BQ7Z3V4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC23.11■■□□□ 1.29
UBE3BQ7Z3V4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC23.11■■□□□ 1.29
UBE3BQ7Z3V4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC23.11■■□□□ 1.29
UBE3BQ7Z3V4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC23.11■■□□□ 1.29
UBE3BQ7Z3V4 TK1-205ENST00000590862 642 ntTSL 3 BASIC23.11■■□□□ 1.29
UBE3BQ7Z3V4 AC012313.10-201ENST00000623509 926 ntBASIC23.11■■□□□ 1.29
UBE3BQ7Z3V4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
UBE3BQ7Z3V4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC23.11■■□□□ 1.29
UBE3BQ7Z3V4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
UBE3BQ7Z3V4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC23.11■■□□□ 1.29
UBE3BQ7Z3V4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
UBE3BQ7Z3V4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
UBE3BQ7Z3V4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
UBE3BQ7Z3V4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC23.11■■□□□ 1.29
UBE3BQ7Z3V4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
UBE3BQ7Z3V4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
UBE3BQ7Z3V4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
UBE3BQ7Z3V4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
UBE3BQ7Z3V4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
UBE3BQ7Z3V4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
UBE3BQ7Z3V4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
UBE3BQ7Z3V4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
UBE3BQ7Z3V4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC23.1■■□□□ 1.29
UBE3BQ7Z3V4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
UBE3BQ7Z3V4 AC009065.1-201ENST00000564055 1225 ntBASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms