Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF550Q7Z398 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF550Q7Z398 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF550Q7Z398 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF550Q7Z398 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.13■□□□□ 0.33
ZNF550Q7Z398 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF550Q7Z398 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.13■□□□□ 0.33
ZNF550Q7Z398 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF550Q7Z398 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ZNF550Q7Z398 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF550Q7Z398 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 AC104581.1-202ENST00000635932 2618 ntBASIC17.12■□□□□ 0.33
ZNF550Q7Z398 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 RCN1P1-201ENST00000400413 996 ntBASIC17.12■□□□□ 0.33
ZNF550Q7Z398 CRYGFP-201ENST00000418459 633 ntBASIC17.12■□□□□ 0.33
ZNF550Q7Z398 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 AC010331.1-201ENST00000611423 582 ntBASIC17.12■□□□□ 0.33
ZNF550Q7Z398 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 HTR7P1-202ENST00000624664 4411 ntBASIC17.12■□□□□ 0.33
ZNF550Q7Z398 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 KRT8P45-201ENST00000414328 1447 ntBASIC17.12■□□□□ 0.33
ZNF550Q7Z398 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
ZNF550Q7Z398 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ZNF550Q7Z398 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF550Q7Z398 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.11■□□□□ 0.33
ZNF550Q7Z398 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF550Q7Z398 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF550Q7Z398 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF550Q7Z398 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF550Q7Z398 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
ZNF550Q7Z398 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF550Q7Z398 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF550Q7Z398 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.11■□□□□ 0.33
ZNF550Q7Z398 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ZNF550Q7Z398 MCCD1P1-208ENST00000445732 328 ntBASIC17.11■□□□□ 0.33
ZNF550Q7Z398 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF550Q7Z398 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF550Q7Z398 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF550Q7Z398 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF550Q7Z398 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF550Q7Z398 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF550Q7Z398 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF550Q7Z398 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
ZNF550Q7Z398 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF550Q7Z398 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
ZNF550Q7Z398 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF550Q7Z398 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
ZNF550Q7Z398 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF550Q7Z398 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF550Q7Z398 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF550Q7Z398 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF550Q7Z398 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ZNF550Q7Z398 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.1■□□□□ 0.33
ZNF550Q7Z398 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF550Q7Z398 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.1■□□□□ 0.33
ZNF550Q7Z398 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF550Q7Z398 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF550Q7Z398 AC126763.1-201ENST00000552015 2118 ntBASIC17.1■□□□□ 0.33
ZNF550Q7Z398 AP005242.2-201ENST00000580065 1175 ntBASIC17.1■□□□□ 0.33
ZNF550Q7Z398 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF550Q7Z398 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF550Q7Z398 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF550Q7Z398 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms