Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SCXQ7RTU7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SCXQ7RTU7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SCXQ7RTU7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC12.29□□□□□ -0.44
SCXQ7RTU7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC12.29□□□□□ -0.44
SCXQ7RTU7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SCXQ7RTU7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC12.29□□□□□ -0.44
SCXQ7RTU7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SCXQ7RTU7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC12.29□□□□□ -0.44
SCXQ7RTU7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
SCXQ7RTU7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SCXQ7RTU7 MFAP1P1-201ENST00000442257 1255 ntBASIC12.29□□□□□ -0.44
SCXQ7RTU7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC12.29□□□□□ -0.44
SCXQ7RTU7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SCXQ7RTU7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC12.29□□□□□ -0.44
SCXQ7RTU7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC12.29□□□□□ -0.44
SCXQ7RTU7 AC130371.2-201ENST00000619443 611 ntBASIC12.29□□□□□ -0.44
SCXQ7RTU7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SCXQ7RTU7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SCXQ7RTU7 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SCXQ7RTU7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC12.29□□□□□ -0.44
SCXQ7RTU7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC12.29□□□□□ -0.44
SCXQ7RTU7 GOLGA2P11-201ENST00000562660 1621 ntBASIC12.29□□□□□ -0.44
SCXQ7RTU7 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
SCXQ7RTU7 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
SCXQ7RTU7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SCXQ7RTU7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC12.28□□□□□ -0.44
SCXQ7RTU7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SCXQ7RTU7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
SCXQ7RTU7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCXQ7RTU7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC12.28□□□□□ -0.44
SCXQ7RTU7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SCXQ7RTU7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCXQ7RTU7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SCXQ7RTU7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SCXQ7RTU7 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC12.28□□□□□ -0.44
SCXQ7RTU7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCXQ7RTU7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SCXQ7RTU7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SCXQ7RTU7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCXQ7RTU7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCXQ7RTU7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCXQ7RTU7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC12.28□□□□□ -0.44
SCXQ7RTU7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SCXQ7RTU7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SCXQ7RTU7 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCXQ7RTU7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC12.28□□□□□ -0.44
SCXQ7RTU7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCXQ7RTU7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCXQ7RTU7 HIST1H2APS4-201ENST00000362070 348 ntBASIC12.28□□□□□ -0.44
SCXQ7RTU7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC12.28□□□□□ -0.44
SCXQ7RTU7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SCXQ7RTU7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SCXQ7RTU7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC12.28□□□□□ -0.44
SCXQ7RTU7 AC008040.2-201ENST00000461049 708 ntBASIC12.28□□□□□ -0.44
SCXQ7RTU7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC12.28□□□□□ -0.44
SCXQ7RTU7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC12.28□□□□□ -0.44
SCXQ7RTU7 DUX4L26-201ENST00000489078 1255 ntBASIC12.28□□□□□ -0.44
SCXQ7RTU7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
SCXQ7RTU7 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC12.28□□□□□ -0.44
SCXQ7RTU7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC12.28□□□□□ -0.44
SCXQ7RTU7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC12.28□□□□□ -0.44
SCXQ7RTU7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCXQ7RTU7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCXQ7RTU7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SCXQ7RTU7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCXQ7RTU7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCXQ7RTU7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
SCXQ7RTU7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC12.28□□□□□ -0.44
SCXQ7RTU7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC12.28□□□□□ -0.44
SCXQ7RTU7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCXQ7RTU7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCXQ7RTU7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCXQ7RTU7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCXQ7RTU7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
SCXQ7RTU7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SCXQ7RTU7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SCXQ7RTU7 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
SCXQ7RTU7 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC12.27□□□□□ -0.44
SCXQ7RTU7 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SCXQ7RTU7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SCXQ7RTU7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SCXQ7RTU7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC12.27□□□□□ -0.44
SCXQ7RTU7 AC005332.7-201ENST00000614046 2005 ntBASIC12.27□□□□□ -0.44
SCXQ7RTU7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC12.27□□□□□ -0.44
SCXQ7RTU7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SCXQ7RTU7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SCXQ7RTU7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
SCXQ7RTU7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SCXQ7RTU7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SCXQ7RTU7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SCXQ7RTU7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC12.27□□□□□ -0.45
SCXQ7RTU7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC12.27□□□□□ -0.45
SCXQ7RTU7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC12.27□□□□□ -0.45
SCXQ7RTU7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC12.27□□□□□ -0.45
SCXQ7RTU7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC12.27□□□□□ -0.45
SCXQ7RTU7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SCXQ7RTU7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC12.27□□□□□ -0.45
SCXQ7RTU7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC12.27□□□□□ -0.45
SCXQ7RTU7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms