Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBA1AQ71U36 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TUBA1AQ71U36 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBA1AQ71U36 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TUBA1AQ71U36 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TUBA1AQ71U36 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.15■□□□□ 0.34
TUBA1AQ71U36 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TUBA1AQ71U36 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBA1AQ71U36 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.15■□□□□ 0.34
TUBA1AQ71U36 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBA1AQ71U36 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBA1AQ71U36 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.15■□□□□ 0.34
TUBA1AQ71U36 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TUBA1AQ71U36 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
TUBA1AQ71U36 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TUBA1AQ71U36 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.15■□□□□ 0.34
TUBA1AQ71U36 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.15■□□□□ 0.34
TUBA1AQ71U36 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.15■□□□□ 0.34
TUBA1AQ71U36 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.15■□□□□ 0.34
TUBA1AQ71U36 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBA1AQ71U36 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TUBA1AQ71U36 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBA1AQ71U36 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBA1AQ71U36 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TUBA1AQ71U36 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.15■□□□□ 0.34
TUBA1AQ71U36 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBA1AQ71U36 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBA1AQ71U36 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TUBA1AQ71U36 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TUBA1AQ71U36 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
TUBA1AQ71U36 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TUBA1AQ71U36 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
TUBA1AQ71U36 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.15■□□□□ 0.34
TUBA1AQ71U36 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TUBA1AQ71U36 IRX1P1-201ENST00000438849 1838 ntBASIC17.14■□□□□ 0.34
TUBA1AQ71U36 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
TUBA1AQ71U36 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.14■□□□□ 0.34
TUBA1AQ71U36 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.14■□□□□ 0.33
TUBA1AQ71U36 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TUBA1AQ71U36 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA1AQ71U36 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA1AQ71U36 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.14■□□□□ 0.33
TUBA1AQ71U36 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA1AQ71U36 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TUBA1AQ71U36 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA1AQ71U36 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA1AQ71U36 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TUBA1AQ71U36 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.14■□□□□ 0.33
TUBA1AQ71U36 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.14■□□□□ 0.33
TUBA1AQ71U36 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA1AQ71U36 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA1AQ71U36 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA1AQ71U36 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.14■□□□□ 0.33
TUBA1AQ71U36 UBE2SP1-201ENST00000450587 669 ntBASIC17.14■□□□□ 0.33
TUBA1AQ71U36 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA1AQ71U36 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.14■□□□□ 0.33
TUBA1AQ71U36 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
TUBA1AQ71U36 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.14■□□□□ 0.33
TUBA1AQ71U36 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
TUBA1AQ71U36 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA1AQ71U36 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA1AQ71U36 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA1AQ71U36 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.14■□□□□ 0.33
TUBA1AQ71U36 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA1AQ71U36 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA1AQ71U36 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA1AQ71U36 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA1AQ71U36 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 OR6D1P-202ENST00000641007 5290 ntBASIC17.13■□□□□ 0.33
TUBA1AQ71U36 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 YBX1P10-201ENST00000444752 975 ntBASIC17.13■□□□□ 0.33
TUBA1AQ71U36 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 AC093827.2-201ENST00000512654 315 ntBASIC17.13■□□□□ 0.33
TUBA1AQ71U36 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 AC004264.1-201ENST00000608354 794 ntBASIC17.13■□□□□ 0.33
TUBA1AQ71U36 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms