Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP45Q70EL2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP45Q70EL2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP45Q70EL2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP45Q70EL2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP45Q70EL2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP45Q70EL2 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.61■□□□□ 0.57
USP45Q70EL2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP45Q70EL2 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP45Q70EL2 CROCCP3-202ENST00000420820 1947 ntBASIC18.61■□□□□ 0.57
USP45Q70EL2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.61■□□□□ 0.57
USP45Q70EL2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP45Q70EL2 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.61■□□□□ 0.57
USP45Q70EL2 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.61■□□□□ 0.57
USP45Q70EL2 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.61■□□□□ 0.57
USP45Q70EL2 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.61■□□□□ 0.57
USP45Q70EL2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
USP45Q70EL2 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP45Q70EL2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.61■□□□□ 0.57
USP45Q70EL2 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP45Q70EL2 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP45Q70EL2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.61■□□□□ 0.57
USP45Q70EL2 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP45Q70EL2 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
USP45Q70EL2 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.61■□□□□ 0.57
USP45Q70EL2 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.61■□□□□ 0.57
USP45Q70EL2 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.61■□□□□ 0.57
USP45Q70EL2 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.61■□□□□ 0.57
USP45Q70EL2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.61■□□□□ 0.57
USP45Q70EL2 AC009065.1-201ENST00000564055 1225 ntBASIC18.61■□□□□ 0.57
USP45Q70EL2 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP45Q70EL2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.61■□□□□ 0.57
USP45Q70EL2 AL590326.2-201ENST00000625139 305 ntBASIC18.61■□□□□ 0.57
USP45Q70EL2 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP45Q70EL2 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP45Q70EL2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP45Q70EL2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP45Q70EL2 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP45Q70EL2 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP45Q70EL2 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.6■□□□□ 0.57
USP45Q70EL2 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USP45Q70EL2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP45Q70EL2 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
USP45Q70EL2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.6■□□□□ 0.57
USP45Q70EL2 KRT8P50-201ENST00000562022 1438 ntBASIC18.6■□□□□ 0.57
USP45Q70EL2 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
USP45Q70EL2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
USP45Q70EL2 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USP45Q70EL2 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP45Q70EL2 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.6■□□□□ 0.57
USP45Q70EL2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP45Q70EL2 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.6■□□□□ 0.57
USP45Q70EL2 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.6■□□□□ 0.57
USP45Q70EL2 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.6■□□□□ 0.57
USP45Q70EL2 MIR3180-4-201ENST00000582223 153 ntBASIC18.6■□□□□ 0.57
USP45Q70EL2 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.6■□□□□ 0.57
USP45Q70EL2 AC010240.3-201ENST00000607688 395 ntBASIC18.6■□□□□ 0.57
USP45Q70EL2 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP45Q70EL2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
USP45Q70EL2 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
USP45Q70EL2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP45Q70EL2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.59■□□□□ 0.57
USP45Q70EL2 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.59■□□□□ 0.57
USP45Q70EL2 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP45Q70EL2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP45Q70EL2 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
USP45Q70EL2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
USP45Q70EL2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP45Q70EL2 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
USP45Q70EL2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP45Q70EL2 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP45Q70EL2 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.59■□□□□ 0.57
USP45Q70EL2 STARP1-201ENST00000397973 869 ntBASIC18.59■□□□□ 0.57
USP45Q70EL2 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
USP45Q70EL2 FAM8A6P-201ENST00000407496 1135 ntBASIC18.59■□□□□ 0.57
USP45Q70EL2 MIR1224-201ENST00000408193 85 ntBASIC18.59■□□□□ 0.57
USP45Q70EL2 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.59■□□□□ 0.57
USP45Q70EL2 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.59■□□□□ 0.57
USP45Q70EL2 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
USP45Q70EL2 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.59■□□□□ 0.57
USP45Q70EL2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
USP45Q70EL2 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
USP45Q70EL2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.59■□□□□ 0.57
USP45Q70EL2 BCL2-203ENST00000589955 5011 ntBASIC18.59■□□□□ 0.57
USP45Q70EL2 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP45Q70EL2 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
USP45Q70EL2 TNXA-203ENST00000507684 2038 ntBASIC18.59■□□□□ 0.57
USP45Q70EL2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP45Q70EL2 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.58■□□□□ 0.57
USP45Q70EL2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
USP45Q70EL2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.58■□□□□ 0.57
USP45Q70EL2 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
USP45Q70EL2 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
USP45Q70EL2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
USP45Q70EL2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
USP45Q70EL2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
USP45Q70EL2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
USP45Q70EL2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
USP45Q70EL2 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
USP45Q70EL2 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms