Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT39Q6A163 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.05■□□□□ 0.8
KRT39Q6A163 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT39Q6A163 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT39Q6A163 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.05■□□□□ 0.8
KRT39Q6A163 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.05■□□□□ 0.8
KRT39Q6A163 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.05■□□□□ 0.8
KRT39Q6A163 AC012306.2-201ENST00000609350 630 ntBASIC20.05■□□□□ 0.8
KRT39Q6A163 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT39Q6A163 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
KRT39Q6A163 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT39Q6A163 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRT39Q6A163 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRT39Q6A163 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
KRT39Q6A163 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.05■□□□□ 0.8
KRT39Q6A163 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.05■□□□□ 0.8
KRT39Q6A163 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT39Q6A163 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT39Q6A163 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT39Q6A163 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRT39Q6A163 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT39Q6A163 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
KRT39Q6A163 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT39Q6A163 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
KRT39Q6A163 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT39Q6A163 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.04■□□□□ 0.8
KRT39Q6A163 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.04■□□□□ 0.8
KRT39Q6A163 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.04■□□□□ 0.8
KRT39Q6A163 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.04■□□□□ 0.8
KRT39Q6A163 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT39Q6A163 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT39Q6A163 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT39Q6A163 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KRT39Q6A163 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.04■□□□□ 0.8
KRT39Q6A163 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT39Q6A163 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT39Q6A163 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT39Q6A163 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.04■□□□□ 0.8
KRT39Q6A163 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT39Q6A163 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT39Q6A163 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.04■□□□□ 0.8
KRT39Q6A163 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.04■□□□□ 0.8
KRT39Q6A163 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT39Q6A163 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT39Q6A163 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT39Q6A163 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.04■□□□□ 0.8
KRT39Q6A163 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KRT39Q6A163 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
KRT39Q6A163 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.04■□□□□ 0.8
KRT39Q6A163 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.04■□□□□ 0.8
KRT39Q6A163 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.04■□□□□ 0.8
KRT39Q6A163 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
KRT39Q6A163 AC097493.4-201ENST00000641197 219 ntBASIC20.04■□□□□ 0.8
KRT39Q6A163 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.04■□□□□ 0.8
KRT39Q6A163 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT39Q6A163 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT39Q6A163 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT39Q6A163 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT39Q6A163 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT39Q6A163 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.04■□□□□ 0.8
KRT39Q6A163 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.03■□□□□ 0.8
KRT39Q6A163 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.03■□□□□ 0.8
KRT39Q6A163 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT39Q6A163 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT39Q6A163 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.03■□□□□ 0.8
KRT39Q6A163 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT39Q6A163 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KRT39Q6A163 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KRT39Q6A163 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT39Q6A163 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT39Q6A163 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.03■□□□□ 0.8
KRT39Q6A163 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KRT39Q6A163 SLC25A3P1-201ENST00000443844 931 ntBASIC20.03■□□□□ 0.8
KRT39Q6A163 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.03■□□□□ 0.8
KRT39Q6A163 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.03■□□□□ 0.8
KRT39Q6A163 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.03■□□□□ 0.8
KRT39Q6A163 AC112497.1-201ENST00000624824 639 ntBASIC20.03■□□□□ 0.8
KRT39Q6A163 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
KRT39Q6A163 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT39Q6A163 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT39Q6A163 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
KRT39Q6A163 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
KRT39Q6A163 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT39Q6A163 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
KRT39Q6A163 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT39Q6A163 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT39Q6A163 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT39Q6A163 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.02■□□□□ 0.8
KRT39Q6A163 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
KRT39Q6A163 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT39Q6A163 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
KRT39Q6A163 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.02■□□□□ 0.8
KRT39Q6A163 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
KRT39Q6A163 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT39Q6A163 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT39Q6A163 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
KRT39Q6A163 AC009947.2-201ENST00000444014 672 ntBASIC20.02■□□□□ 0.8
KRT39Q6A163 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT39Q6A163 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.02■□□□□ 0.8
KRT39Q6A163 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms