Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 AL163051.1-201ENST00000569214 1512 ntBASIC21.7■■□□□ 1.07
CCDC178Q5BJE1 MYLKP1-201ENST00000509077 1580 ntBASIC21.7■■□□□ 1.06
CCDC178Q5BJE1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC178Q5BJE1 AC120498.9-201ENST00000339021 3867 ntBASIC21.7■■□□□ 1.06
CCDC178Q5BJE1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CCDC178Q5BJE1 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC178Q5BJE1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CCDC178Q5BJE1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC178Q5BJE1 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC178Q5BJE1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CCDC178Q5BJE1 ARMC10P1-201ENST00000313754 855 ntBASIC21.7■■□□□ 1.06
CCDC178Q5BJE1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC178Q5BJE1 AC112907.2-201ENST00000448639 330 ntBASIC21.7■■□□□ 1.06
CCDC178Q5BJE1 AL671277.2-201ENST00000458060 996 ntBASIC21.7■■□□□ 1.06
CCDC178Q5BJE1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.7■■□□□ 1.06
CCDC178Q5BJE1 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.7■■□□□ 1.06
CCDC178Q5BJE1 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC178Q5BJE1 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CCDC178Q5BJE1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC178Q5BJE1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.7■■□□□ 1.06
CCDC178Q5BJE1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC178Q5BJE1 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC178Q5BJE1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC178Q5BJE1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC178Q5BJE1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC178Q5BJE1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC178Q5BJE1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC178Q5BJE1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC178Q5BJE1 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CCDC178Q5BJE1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC178Q5BJE1 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC178Q5BJE1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC178Q5BJE1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC178Q5BJE1 AC087388.1-201ENST00000571370 1112 ntBASIC21.69■■□□□ 1.06
CCDC178Q5BJE1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC178Q5BJE1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
CCDC178Q5BJE1 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.69■■□□□ 1.06
CCDC178Q5BJE1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC178Q5BJE1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC178Q5BJE1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC178Q5BJE1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.69■■□□□ 1.06
CCDC178Q5BJE1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC178Q5BJE1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.69■■□□□ 1.06
CCDC178Q5BJE1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC178Q5BJE1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC178Q5BJE1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.69■■□□□ 1.06
CCDC178Q5BJE1 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC178Q5BJE1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC178Q5BJE1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.69■■□□□ 1.06
CCDC178Q5BJE1 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC178Q5BJE1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC178Q5BJE1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC178Q5BJE1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.68■■□□□ 1.06
CCDC178Q5BJE1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC178Q5BJE1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC178Q5BJE1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC178Q5BJE1 AL031133.1-201ENST00000406807 723 ntBASIC21.68■■□□□ 1.06
CCDC178Q5BJE1 PVRIG2P-201ENST00000435460 978 ntBASIC21.68■■□□□ 1.06
CCDC178Q5BJE1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.68■■□□□ 1.06
CCDC178Q5BJE1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.68■■□□□ 1.06
CCDC178Q5BJE1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.68■■□□□ 1.06
CCDC178Q5BJE1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC178Q5BJE1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.68■■□□□ 1.06
CCDC178Q5BJE1 HYMAI.1-201ENST00000620949 238 ntBASIC21.68■■□□□ 1.06
CCDC178Q5BJE1 AL121956.5-201ENST00000625261 221 ntBASIC21.68■■□□□ 1.06
CCDC178Q5BJE1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC178Q5BJE1 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC178Q5BJE1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CCDC178Q5BJE1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.68■■□□□ 1.06
CCDC178Q5BJE1 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC178Q5BJE1 CROCCP3-202ENST00000420820 1947 ntBASIC21.68■■□□□ 1.06
CCDC178Q5BJE1 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CCDC178Q5BJE1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC178Q5BJE1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC178Q5BJE1 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC178Q5BJE1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.68■■□□□ 1.06
CCDC178Q5BJE1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CCDC178Q5BJE1 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC178Q5BJE1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC178Q5BJE1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC178Q5BJE1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC178Q5BJE1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC178Q5BJE1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC178Q5BJE1 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.67■■□□□ 1.06
CCDC178Q5BJE1 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC178Q5BJE1 LINC01311-201ENST00000565162 1445 ntBASIC21.67■■□□□ 1.06
CCDC178Q5BJE1 MIR149-201ENST00000384879 89 ntBASIC21.67■■□□□ 1.06
CCDC178Q5BJE1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC178Q5BJE1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.67■■□□□ 1.06
CCDC178Q5BJE1 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.67■■□□□ 1.06
CCDC178Q5BJE1 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
CCDC178Q5BJE1 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CCDC178Q5BJE1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC178Q5BJE1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC178Q5BJE1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC178Q5BJE1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CCDC178Q5BJE1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
CCDC178Q5BJE1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC178Q5BJE1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms