Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CDCA8Q53HL2 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
CDCA8Q53HL2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC25.59■■□□□ 1.69
CDCA8Q53HL2 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC25.59■■□□□ 1.69
CDCA8Q53HL2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
CDCA8Q53HL2 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC25.59■■□□□ 1.69
CDCA8Q53HL2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC25.59■■□□□ 1.69
CDCA8Q53HL2 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC25.59■■□□□ 1.69
CDCA8Q53HL2 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC25.59■■□□□ 1.69
CDCA8Q53HL2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CDCA8Q53HL2 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CDCA8Q53HL2 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC25.58■■□□□ 1.69
CDCA8Q53HL2 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CDCA8Q53HL2 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CDCA8Q53HL2 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
CDCA8Q53HL2 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
CDCA8Q53HL2 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CDCA8Q53HL2 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CDCA8Q53HL2 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CDCA8Q53HL2 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC25.58■■□□□ 1.69
CDCA8Q53HL2 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC25.58■■□□□ 1.69
CDCA8Q53HL2 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC25.58■■□□□ 1.69
CDCA8Q53HL2 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
CDCA8Q53HL2 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CDCA8Q53HL2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC25.58■■□□□ 1.69
CDCA8Q53HL2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
CDCA8Q53HL2 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
CDCA8Q53HL2 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC25.58■■□□□ 1.68
CDCA8Q53HL2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC25.57■■□□□ 1.68
CDCA8Q53HL2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CDCA8Q53HL2 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC25.57■■□□□ 1.68
CDCA8Q53HL2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
CDCA8Q53HL2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CDCA8Q53HL2 CROCCP3-202ENST00000420820 1947 ntBASIC25.57■■□□□ 1.68
CDCA8Q53HL2 AL162741.1-201ENST00000565563 1558 ntBASIC25.57■■□□□ 1.68
CDCA8Q53HL2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC25.57■■□□□ 1.68
CDCA8Q53HL2 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC25.57■■□□□ 1.68
CDCA8Q53HL2 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CDCA8Q53HL2 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CDCA8Q53HL2 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CDCA8Q53HL2 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC25.57■■□□□ 1.68
CDCA8Q53HL2 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
CDCA8Q53HL2 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC25.57■■□□□ 1.68
CDCA8Q53HL2 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC25.57■■□□□ 1.68
CDCA8Q53HL2 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CDCA8Q53HL2 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
CDCA8Q53HL2 LITAF-220ENST00000620789 692 ntTSL 5 BASIC25.57■■□□□ 1.68
CDCA8Q53HL2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC25.57■■□□□ 1.68
CDCA8Q53HL2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC25.57■■□□□ 1.68
CDCA8Q53HL2 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
CDCA8Q53HL2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC25.56■■□□□ 1.68
CDCA8Q53HL2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
CDCA8Q53HL2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CDCA8Q53HL2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CDCA8Q53HL2 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CDCA8Q53HL2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC25.56■■□□□ 1.68
CDCA8Q53HL2 KRT89P-201ENST00000620027 1478 ntBASIC25.56■■□□□ 1.68
CDCA8Q53HL2 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CDCA8Q53HL2 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC25.56■■□□□ 1.68
CDCA8Q53HL2 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CDCA8Q53HL2 CNP-204ENST00000472031 1019 ntTSL 2 BASIC25.56■■□□□ 1.68
CDCA8Q53HL2 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC25.56■■□□□ 1.68
CDCA8Q53HL2 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CDCA8Q53HL2 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC25.56■■□□□ 1.68
CDCA8Q53HL2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC25.56■■□□□ 1.68
CDCA8Q53HL2 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC25.56■■□□□ 1.68
CDCA8Q53HL2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC25.56■■□□□ 1.68
CDCA8Q53HL2 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
CDCA8Q53HL2 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC25.56■■□□□ 1.68
CDCA8Q53HL2 WDR6-223ENST00000627177 207 ntTSL 2 BASIC25.56■■□□□ 1.68
CDCA8Q53HL2 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC25.56■■□□□ 1.68
CDCA8Q53HL2 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CDCA8Q53HL2 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
CDCA8Q53HL2 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CDCA8Q53HL2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
CDCA8Q53HL2 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
CDCA8Q53HL2 AC018445.3-201ENST00000624177 1945 ntBASIC25.55■■□□□ 1.68
CDCA8Q53HL2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
CDCA8Q53HL2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CDCA8Q53HL2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CDCA8Q53HL2 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CDCA8Q53HL2 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CDCA8Q53HL2 FXN-203ENST00000396366 922 ntTSL 2 BASIC25.55■■□□□ 1.68
CDCA8Q53HL2 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC25.55■■□□□ 1.68
CDCA8Q53HL2 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC25.55■■□□□ 1.68
CDCA8Q53HL2 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC25.55■■□□□ 1.68
CDCA8Q53HL2 AC008687.5-201ENST00000593746 558 ntBASIC25.55■■□□□ 1.68
CDCA8Q53HL2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC25.55■■□□□ 1.68
CDCA8Q53HL2 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC25.55■■□□□ 1.68
CDCA8Q53HL2 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC25.55■■□□□ 1.68
CDCA8Q53HL2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
CDCA8Q53HL2 AL499627.1-201ENST00000569373 2188 ntBASIC25.55■■□□□ 1.68
CDCA8Q53HL2 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CDCA8Q53HL2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC25.54■■□□□ 1.68
CDCA8Q53HL2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC25.54■■□□□ 1.68
CDCA8Q53HL2 ASL-204ENST00000395331 1538 ntTSL 5 BASIC25.54■■□□□ 1.68
CDCA8Q53HL2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC25.54■■□□□ 1.68
CDCA8Q53HL2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC25.54■■□□□ 1.68
CDCA8Q53HL2 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CDCA8Q53HL2 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC25.54■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms