Protein–RNA interactions for Protein: Q01959

SLC6A3, Sodium-dependent dopamine transporter, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A3Q01959 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
SLC6A3Q01959 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A3Q01959 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A3Q01959 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.44■□□□□ 0.7
SLC6A3Q01959 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A3Q01959 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A3Q01959 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.44■□□□□ 0.7
SLC6A3Q01959 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A3Q01959 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SLC6A3Q01959 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A3Q01959 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.44■□□□□ 0.7
SLC6A3Q01959 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A3Q01959 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.44■□□□□ 0.7
SLC6A3Q01959 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SLC6A3Q01959 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC6A3Q01959 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC6A3Q01959 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SLC6A3Q01959 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SLC6A3Q01959 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A3Q01959 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC6A3Q01959 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SLC6A3Q01959 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A3Q01959 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC6A3Q01959 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A3Q01959 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A3Q01959 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A3Q01959 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A3Q01959 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC6A3Q01959 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A3Q01959 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A3Q01959 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A3Q01959 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC6A3Q01959 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC6A3Q01959 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SLC6A3Q01959 AC009113.1-201ENST00000570267 2443 ntBASIC19.43■□□□□ 0.7
SLC6A3Q01959 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A3Q01959 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
SLC6A3Q01959 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SLC6A3Q01959 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.43■□□□□ 0.7
SLC6A3Q01959 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A3Q01959 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A3Q01959 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A3Q01959 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A3Q01959 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
SLC6A3Q01959 AP000523.1-201ENST00000398242 1049 ntBASIC19.43■□□□□ 0.7
SLC6A3Q01959 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A3Q01959 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC6A3Q01959 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A3Q01959 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.43■□□□□ 0.7
SLC6A3Q01959 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.43■□□□□ 0.7
SLC6A3Q01959 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SLC6A3Q01959 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC6A3Q01959 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC6A3Q01959 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC6A3Q01959 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.43■□□□□ 0.7
SLC6A3Q01959 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.43■□□□□ 0.7
SLC6A3Q01959 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.43■□□□□ 0.7
SLC6A3Q01959 AC024243.1-201ENST00000609234 778 ntBASIC19.43■□□□□ 0.7
SLC6A3Q01959 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.43■□□□□ 0.7
SLC6A3Q01959 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A3Q01959 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SLC6A3Q01959 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A3Q01959 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A3Q01959 AC104581.1-202ENST00000635932 2618 ntBASIC19.43■□□□□ 0.7
SLC6A3Q01959 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A3Q01959 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A3Q01959 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.43■□□□□ 0.7
SLC6A3Q01959 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.43■□□□□ 0.7
SLC6A3Q01959 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A3Q01959 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A3Q01959 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.43■□□□□ 0.7
SLC6A3Q01959 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A3Q01959 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC6A3Q01959 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SLC6A3Q01959 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A3Q01959 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A3Q01959 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A3Q01959 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A3Q01959 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.42■□□□□ 0.7
SLC6A3Q01959 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A3Q01959 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.42■□□□□ 0.7
SLC6A3Q01959 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A3Q01959 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A3Q01959 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC6A3Q01959 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
SLC6A3Q01959 AL163051.1-201ENST00000569214 1512 ntBASIC19.42■□□□□ 0.7
SLC6A3Q01959 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A3Q01959 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SLC6A3Q01959 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
SLC6A3Q01959 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A3Q01959 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A3Q01959 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SLC6A3Q01959 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A3Q01959 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A3Q01959 SEC1P-202ENST00000473944 940 ntBASIC19.42■□□□□ 0.7
SLC6A3Q01959 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC6A3Q01959 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC6A3Q01959 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A3Q01959 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC6A3Q01959 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms