Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
CXCR4P61073 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CXCR4P61073 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CXCR4P61073 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CXCR4P61073 AC080080.1-201ENST00000625121 2420 ntBASIC16.94■□□□□ 0.3
CXCR4P61073 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CXCR4P61073 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CXCR4P61073 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CXCR4P61073 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CXCR4P61073 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.94■□□□□ 0.3
CXCR4P61073 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CXCR4P61073 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.94■□□□□ 0.3
CXCR4P61073 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.94■□□□□ 0.3
CXCR4P61073 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CXCR4P61073 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.94■□□□□ 0.3
CXCR4P61073 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CXCR4P61073 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CXCR4P61073 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CXCR4P61073 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CXCR4P61073 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
CXCR4P61073 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CXCR4P61073 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.94■□□□□ 0.3
CXCR4P61073 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CXCR4P61073 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CXCR4P61073 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.94■□□□□ 0.3
CXCR4P61073 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CXCR4P61073 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CXCR4P61073 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CXCR4P61073 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CXCR4P61073 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
CXCR4P61073 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.93■□□□□ 0.3
CXCR4P61073 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CXCR4P61073 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CXCR4P61073 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
CXCR4P61073 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CXCR4P61073 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CXCR4P61073 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.93■□□□□ 0.3
CXCR4P61073 AD000864.1-201ENST00000624076 2295 ntBASIC16.93■□□□□ 0.3
CXCR4P61073 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CXCR4P61073 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CXCR4P61073 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.93■□□□□ 0.3
CXCR4P61073 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.93■□□□□ 0.3
CXCR4P61073 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.93■□□□□ 0.3
CXCR4P61073 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.93■□□□□ 0.3
CXCR4P61073 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.93■□□□□ 0.3
CXCR4P61073 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.93■□□□□ 0.3
CXCR4P61073 AC097658.1-201ENST00000475555 843 ntBASIC16.93■□□□□ 0.3
CXCR4P61073 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.93■□□□□ 0.3
CXCR4P61073 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.93■□□□□ 0.3
CXCR4P61073 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CXCR4P61073 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CXCR4P61073 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CXCR4P61073 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.93■□□□□ 0.3
CXCR4P61073 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CXCR4P61073 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CXCR4P61073 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CXCR4P61073 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CXCR4P61073 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.93■□□□□ 0.3
CXCR4P61073 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CXCR4P61073 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CXCR4P61073 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.92■□□□□ 0.3
CXCR4P61073 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CXCR4P61073 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CXCR4P61073 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CXCR4P61073 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CXCR4P61073 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CXCR4P61073 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CXCR4P61073 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CXCR4P61073 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CXCR4P61073 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.92■□□□□ 0.3
CXCR4P61073 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.92■□□□□ 0.3
CXCR4P61073 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CXCR4P61073 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CXCR4P61073 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CXCR4P61073 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CXCR4P61073 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CXCR4P61073 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CXCR4P61073 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.92■□□□□ 0.3
CXCR4P61073 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CXCR4P61073 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.92■□□□□ 0.3
CXCR4P61073 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.92■□□□□ 0.3
CXCR4P61073 PNMA6B-201ENST00000538162 1200 ntBASIC16.92■□□□□ 0.3
CXCR4P61073 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.92■□□□□ 0.3
CXCR4P61073 MIR4758-201ENST00000577688 71 ntBASIC16.92■□□□□ 0.3
CXCR4P61073 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.92■□□□□ 0.3
CXCR4P61073 AC120498.8-201ENST00000614275 531 ntBASIC16.92■□□□□ 0.3
CXCR4P61073 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CXCR4P61073 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CXCR4P61073 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.92■□□□□ 0.3
CXCR4P61073 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CXCR4P61073 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CXCR4P61073 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
CXCR4P61073 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CXCR4P61073 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.92■□□□□ 0.3
CXCR4P61073 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CXCR4P61073 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CXCR4P61073 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CXCR4P61073 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CXCR4P61073 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.91■□□□□ 0.3
CXCR4P61073 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms