Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
CLTCL1P53675 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC26.56■■□□□ 1.84
CLTCL1P53675 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC26.56■■□□□ 1.84
CLTCL1P53675 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
CLTCL1P53675 HLA-A-201ENST00000376802 1334 ntBASIC26.55■■□□□ 1.84
CLTCL1P53675 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CLTCL1P53675 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC26.55■■□□□ 1.84
CLTCL1P53675 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CLTCL1P53675 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CLTCL1P53675 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC26.55■■□□□ 1.84
CLTCL1P53675 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CLTCL1P53675 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC26.55■■□□□ 1.84
CLTCL1P53675 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC26.55■■□□□ 1.84
CLTCL1P53675 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC26.55■■□□□ 1.84
CLTCL1P53675 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CLTCL1P53675 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC26.55■■□□□ 1.84
CLTCL1P53675 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC26.55■■□□□ 1.84
CLTCL1P53675 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
CLTCL1P53675 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CLTCL1P53675 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CLTCL1P53675 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CLTCL1P53675 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC26.54■■□□□ 1.84
CLTCL1P53675 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC26.54■■□□□ 1.84
CLTCL1P53675 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC26.54■■□□□ 1.84
CLTCL1P53675 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC26.54■■□□□ 1.84
CLTCL1P53675 GXYLT1P4-201ENST00000613576 1192 ntBASIC26.54■■□□□ 1.84
CLTCL1P53675 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC26.54■■□□□ 1.84
CLTCL1P53675 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CLTCL1P53675 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CLTCL1P53675 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CLTCL1P53675 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CLTCL1P53675 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC26.54■■□□□ 1.84
CLTCL1P53675 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
CLTCL1P53675 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC26.54■■□□□ 1.84
CLTCL1P53675 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC26.54■■□□□ 1.84
CLTCL1P53675 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC26.54■■□□□ 1.84
CLTCL1P53675 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC26.54■■□□□ 1.84
CLTCL1P53675 MIR7706-201ENST00000613747 67 ntBASIC26.54■■□□□ 1.84
CLTCL1P53675 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CLTCL1P53675 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC26.53■■□□□ 1.84
CLTCL1P53675 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
CLTCL1P53675 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CLTCL1P53675 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CLTCL1P53675 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CLTCL1P53675 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CLTCL1P53675 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CLTCL1P53675 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC26.53■■□□□ 1.84
CLTCL1P53675 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CLTCL1P53675 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC26.53■■□□□ 1.84
CLTCL1P53675 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC26.53■■□□□ 1.84
CLTCL1P53675 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CLTCL1P53675 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CLTCL1P53675 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
CLTCL1P53675 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
CLTCL1P53675 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CLTCL1P53675 AC096582.2-201ENST00000510860 516 ntBASIC26.53■■□□□ 1.84
CLTCL1P53675 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
CLTCL1P53675 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
CLTCL1P53675 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CLTCL1P53675 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CLTCL1P53675 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CLTCL1P53675 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC26.52■■□□□ 1.84
CLTCL1P53675 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CLTCL1P53675 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC26.52■■□□□ 1.84
CLTCL1P53675 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
CLTCL1P53675 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CLTCL1P53675 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CLTCL1P53675 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CLTCL1P53675 DDT-203ENST00000403754 569 ntTSL 3 BASIC26.52■■□□□ 1.84
CLTCL1P53675 DDT-206ENST00000430101 573 ntTSL 2 BASIC26.52■■□□□ 1.84
CLTCL1P53675 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC26.52■■□□□ 1.84
CLTCL1P53675 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC26.52■■□□□ 1.84
CLTCL1P53675 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC26.52■■□□□ 1.84
CLTCL1P53675 AC120114.3-201ENST00000611923 658 ntBASIC26.52■■□□□ 1.84
CLTCL1P53675 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC26.52■■□□□ 1.84
CLTCL1P53675 ADM-207ENST00000530439 1839 ntTSL 2 BASIC26.52■■□□□ 1.84
CLTCL1P53675 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
CLTCL1P53675 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CLTCL1P53675 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC26.52■■□□□ 1.84
CLTCL1P53675 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
CLTCL1P53675 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC26.52■■□□□ 1.84
CLTCL1P53675 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
CLTCL1P53675 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
CLTCL1P53675 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC26.51■■□□□ 1.83
CLTCL1P53675 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
CLTCL1P53675 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC26.51■■□□□ 1.83
CLTCL1P53675 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC26.51■■□□□ 1.83
CLTCL1P53675 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC26.51■■□□□ 1.83
CLTCL1P53675 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC26.51■■□□□ 1.83
CLTCL1P53675 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
CLTCL1P53675 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CLTCL1P53675 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CLTCL1P53675 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CLTCL1P53675 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CLTCL1P53675 AC073130.3-201ENST00000624389 2278 ntBASIC26.51■■□□□ 1.83
CLTCL1P53675 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CLTCL1P53675 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
CLTCL1P53675 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CLTCL1P53675 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC26.51■■□□□ 1.83
CLTCL1P53675 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms