Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.19■□□□□ 0.18
GDNFP39905 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.19■□□□□ 0.18
GDNFP39905 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.19■□□□□ 0.18
GDNFP39905 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GDNFP39905 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.19■□□□□ 0.18
GDNFP39905 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GDNFP39905 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GDNFP39905 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GDNFP39905 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GDNFP39905 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GDNFP39905 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
GDNFP39905 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
GDNFP39905 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GDNFP39905 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GDNFP39905 PCDHA12-202ENST00000613593 2588 ntBASIC16.19■□□□□ 0.18
GDNFP39905 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GDNFP39905 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.19■□□□□ 0.18
GDNFP39905 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GDNFP39905 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.18■□□□□ 0.18
GDNFP39905 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GDNFP39905 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.18■□□□□ 0.18
GDNFP39905 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GDNFP39905 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GDNFP39905 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GDNFP39905 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.18■□□□□ 0.18
GDNFP39905 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GDNFP39905 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GDNFP39905 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GDNFP39905 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GDNFP39905 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
GDNFP39905 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GDNFP39905 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.18■□□□□ 0.18
GDNFP39905 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GDNFP39905 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
GDNFP39905 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
GDNFP39905 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.18■□□□□ 0.18
GDNFP39905 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GDNFP39905 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.18■□□□□ 0.18
GDNFP39905 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.18■□□□□ 0.18
GDNFP39905 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.18■□□□□ 0.18
GDNFP39905 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.18■□□□□ 0.18
GDNFP39905 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
GDNFP39905 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.18■□□□□ 0.18
GDNFP39905 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
GDNFP39905 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
GDNFP39905 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.18■□□□□ 0.18
GDNFP39905 PKD1P1-201ENST00000458669 6805 ntBASIC16.17■□□□□ 0.18
GDNFP39905 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.17■□□□□ 0.18
GDNFP39905 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GDNFP39905 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
GDNFP39905 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GDNFP39905 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
GDNFP39905 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
GDNFP39905 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GDNFP39905 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GDNFP39905 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GDNFP39905 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GDNFP39905 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GDNFP39905 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.17■□□□□ 0.18
GDNFP39905 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
GDNFP39905 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.17■□□□□ 0.18
GDNFP39905 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GDNFP39905 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GDNFP39905 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.17■□□□□ 0.18
GDNFP39905 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.17■□□□□ 0.18
GDNFP39905 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
GDNFP39905 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GDNFP39905 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.17■□□□□ 0.18
GDNFP39905 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GDNFP39905 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.17■□□□□ 0.18
GDNFP39905 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GDNFP39905 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GDNFP39905 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.17■□□□□ 0.18
GDNFP39905 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GDNFP39905 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GDNFP39905 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
GDNFP39905 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GDNFP39905 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GDNFP39905 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
GDNFP39905 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GDNFP39905 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GDNFP39905 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.16■□□□□ 0.18
GDNFP39905 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.16■□□□□ 0.18
GDNFP39905 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
GDNFP39905 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GDNFP39905 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GDNFP39905 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.16■□□□□ 0.18
GDNFP39905 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.16■□□□□ 0.18
GDNFP39905 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.16■□□□□ 0.18
GDNFP39905 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
GDNFP39905 AP003097.1-201ENST00000530657 1135 ntBASIC16.16■□□□□ 0.18
GDNFP39905 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.16■□□□□ 0.18
GDNFP39905 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GDNFP39905 AC233263.1-201ENST00000578059 224 ntBASIC16.16■□□□□ 0.18
GDNFP39905 MIR4651-201ENST00000582622 73 ntBASIC16.16■□□□□ 0.18
GDNFP39905 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
GDNFP39905 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.16■□□□□ 0.18
GDNFP39905 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.16■□□□□ 0.18
GDNFP39905 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GDNFP39905 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms