Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RFC1P35251 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RFC1P35251 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFC1P35251 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RFC1P35251 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
RFC1P35251 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RFC1P35251 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFC1P35251 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFC1P35251 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFC1P35251 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFC1P35251 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFC1P35251 MIR564-202ENST00000385049 94 ntBASIC19.59■□□□□ 0.73
RFC1P35251 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RFC1P35251 TSPY17P-201ENST00000450329 467 ntBASIC19.59■□□□□ 0.73
RFC1P35251 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RFC1P35251 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RFC1P35251 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.59■□□□□ 0.73
RFC1P35251 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.59■□□□□ 0.73
RFC1P35251 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFC1P35251 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RFC1P35251 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFC1P35251 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFC1P35251 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFC1P35251 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RFC1P35251 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFC1P35251 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RFC1P35251 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RFC1P35251 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFC1P35251 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.58■□□□□ 0.73
RFC1P35251 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.58■□□□□ 0.73
RFC1P35251 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
RFC1P35251 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFC1P35251 INGX-201ENST00000359239 846 ntBASIC19.58■□□□□ 0.72
RFC1P35251 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.58■□□□□ 0.72
RFC1P35251 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFC1P35251 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RFC1P35251 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFC1P35251 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFC1P35251 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFC1P35251 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFC1P35251 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RFC1P35251 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.58■□□□□ 0.72
RFC1P35251 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.58■□□□□ 0.72
RFC1P35251 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RFC1P35251 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RFC1P35251 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFC1P35251 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RFC1P35251 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFC1P35251 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.57■□□□□ 0.72
RFC1P35251 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFC1P35251 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.57■□□□□ 0.72
RFC1P35251 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RFC1P35251 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFC1P35251 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RFC1P35251 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
RFC1P35251 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFC1P35251 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
RFC1P35251 MMP23A-201ENST00000234610 1017 ntBASIC19.57■□□□□ 0.72
RFC1P35251 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFC1P35251 TSPY14P-201ENST00000303979 915 ntBASIC19.57■□□□□ 0.72
RFC1P35251 AC007663.1-201ENST00000438948 1240 ntBASIC19.57■□□□□ 0.72
RFC1P35251 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RFC1P35251 C2orf69P3-201ENST00000565542 1120 ntBASIC19.57■□□□□ 0.72
RFC1P35251 AC010947.1-201ENST00000623454 693 ntBASIC19.57■□□□□ 0.72
RFC1P35251 AC073592.3-201ENST00000625118 1834 ntBASIC19.57■□□□□ 0.72
RFC1P35251 KRT8P45-201ENST00000414328 1447 ntBASIC19.57■□□□□ 0.72
RFC1P35251 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RFC1P35251 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RFC1P35251 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFC1P35251 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RFC1P35251 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.56■□□□□ 0.72
RFC1P35251 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFC1P35251 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.56■□□□□ 0.72
RFC1P35251 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.56■□□□□ 0.72
RFC1P35251 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFC1P35251 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RFC1P35251 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFC1P35251 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFC1P35251 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
RFC1P35251 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.56■□□□□ 0.72
RFC1P35251 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RFC1P35251 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.56■□□□□ 0.72
RFC1P35251 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.56■□□□□ 0.72
RFC1P35251 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.56■□□□□ 0.72
RFC1P35251 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.56■□□□□ 0.72
RFC1P35251 CCR12P-201ENST00000446203 998 ntBASIC19.56■□□□□ 0.72
RFC1P35251 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.56■□□□□ 0.72
RFC1P35251 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.56■□□□□ 0.72
RFC1P35251 AC116562.4-202ENST00000641738 218 ntBASIC19.56■□□□□ 0.72
RFC1P35251 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.56■□□□□ 0.72
RFC1P35251 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
RFC1P35251 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.55■□□□□ 0.72
RFC1P35251 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFC1P35251 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFC1P35251 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.55■□□□□ 0.72
RFC1P35251 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
RFC1P35251 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFC1P35251 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
RFC1P35251 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFC1P35251 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms