Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL8A2P25067 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.69■□□□□ 0.1
COL8A2P25067 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
COL8A2P25067 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL8A2P25067 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COL8A2P25067 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.69■□□□□ 0.1
COL8A2P25067 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL8A2P25067 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COL8A2P25067 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
COL8A2P25067 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COL8A2P25067 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.69■□□□□ 0.1
COL8A2P25067 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COL8A2P25067 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.69■□□□□ 0.1
COL8A2P25067 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.69■□□□□ 0.1
COL8A2P25067 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COL8A2P25067 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.69■□□□□ 0.1
COL8A2P25067 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COL8A2P25067 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL8A2P25067 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL8A2P25067 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COL8A2P25067 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.69■□□□□ 0.1
COL8A2P25067 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.69■□□□□ 0.1
COL8A2P25067 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL8A2P25067 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL8A2P25067 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL8A2P25067 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.68■□□□□ 0.1
COL8A2P25067 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
COL8A2P25067 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COL8A2P25067 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
COL8A2P25067 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL8A2P25067 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL8A2P25067 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
COL8A2P25067 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
COL8A2P25067 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL8A2P25067 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL8A2P25067 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
COL8A2P25067 AC006333.2-201ENST00000607957 2099 ntBASIC15.68■□□□□ 0.1
COL8A2P25067 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL8A2P25067 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL8A2P25067 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COL8A2P25067 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
COL8A2P25067 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL8A2P25067 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL8A2P25067 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.68■□□□□ 0.1
COL8A2P25067 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL8A2P25067 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
COL8A2P25067 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.68■□□□□ 0.1
COL8A2P25067 SPDYE13P-201ENST00000445314 798 ntBASIC15.68■□□□□ 0.1
COL8A2P25067 AC104390.1-201ENST00000555663 520 ntBASIC15.68■□□□□ 0.1
COL8A2P25067 MIR3917-201ENST00000580971 93 ntBASIC15.68■□□□□ 0.1
COL8A2P25067 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.68■□□□□ 0.1
COL8A2P25067 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.68■□□□□ 0.1
COL8A2P25067 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.68■□□□□ 0.1
COL8A2P25067 AC079602.3-201ENST00000623931 403 ntBASIC15.68■□□□□ 0.1
COL8A2P25067 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.68■□□□□ 0.1
COL8A2P25067 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL8A2P25067 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COL8A2P25067 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.68■□□□□ 0.1
COL8A2P25067 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COL8A2P25067 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL8A2P25067 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.68■□□□□ 0.1
COL8A2P25067 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL8A2P25067 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
COL8A2P25067 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL8A2P25067 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.67■□□□□ 0.1
COL8A2P25067 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COL8A2P25067 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL8A2P25067 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
COL8A2P25067 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COL8A2P25067 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COL8A2P25067 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.67■□□□□ 0.1
COL8A2P25067 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.67■□□□□ 0.1
COL8A2P25067 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
COL8A2P25067 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL8A2P25067 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL8A2P25067 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COL8A2P25067 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.67■□□□□ 0.1
COL8A2P25067 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
COL8A2P25067 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.67■□□□□ 0.1
COL8A2P25067 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
COL8A2P25067 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.67■□□□□ 0.1
COL8A2P25067 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COL8A2P25067 AC093458.2-201ENST00000623150 629 ntBASIC15.67■□□□□ 0.1
COL8A2P25067 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.67■□□□□ 0.1
COL8A2P25067 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL8A2P25067 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL8A2P25067 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COL8A2P25067 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COL8A2P25067 AC034236.2-201ENST00000606662 1610 ntBASIC15.67■□□□□ 0.1
COL8A2P25067 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COL8A2P25067 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COL8A2P25067 KRT8P7-201ENST00000533003 1432 ntBASIC15.67■□□□□ 0.1
COL8A2P25067 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COL8A2P25067 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL8A2P25067 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL8A2P25067 TNXA-203ENST00000507684 2038 ntBASIC15.67■□□□□ 0.1
COL8A2P25067 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.66■□□□□ 0.1
COL8A2P25067 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL8A2P25067 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.66■□□□□ 0.1
COL8A2P25067 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms