Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCND1P24385 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCND1P24385 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.7■□□□□ 0.58
CCND1P24385 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.7■□□□□ 0.58
CCND1P24385 NIFKP9-201ENST00000419265 221 ntBASIC18.7■□□□□ 0.58
CCND1P24385 GCSHP5-201ENST00000443090 522 ntBASIC18.7■□□□□ 0.58
CCND1P24385 UBE2SP1-201ENST00000450587 669 ntBASIC18.7■□□□□ 0.58
CCND1P24385 AP002982.1-201ENST00000492365 877 ntBASIC18.7■□□□□ 0.58
CCND1P24385 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.7■□□□□ 0.58
CCND1P24385 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.7■□□□□ 0.58
CCND1P24385 HLA-A-209ENST00000638375 975 ntBASIC18.7■□□□□ 0.58
CCND1P24385 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCND1P24385 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CCND1P24385 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCND1P24385 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCND1P24385 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCND1P24385 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.7■□□□□ 0.58
CCND1P24385 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.7■□□□□ 0.58
CCND1P24385 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCND1P24385 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCND1P24385 LINC00896-202ENST00000609602 2128 ntBASIC18.7■□□□□ 0.58
CCND1P24385 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCND1P24385 AL512353.2-201ENST00000448759 1962 ntBASIC18.7■□□□□ 0.58
CCND1P24385 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.7■□□□□ 0.58
CCND1P24385 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCND1P24385 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.69■□□□□ 0.58
CCND1P24385 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.69■□□□□ 0.58
CCND1P24385 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.69■□□□□ 0.58
CCND1P24385 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CCND1P24385 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCND1P24385 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCND1P24385 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCND1P24385 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCND1P24385 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.69■□□□□ 0.58
CCND1P24385 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
CCND1P24385 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCND1P24385 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.69■□□□□ 0.58
CCND1P24385 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.69■□□□□ 0.58
CCND1P24385 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCND1P24385 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCND1P24385 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCND1P24385 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.69■□□□□ 0.58
CCND1P24385 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCND1P24385 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.69■□□□□ 0.58
CCND1P24385 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.69■□□□□ 0.58
CCND1P24385 AC098590.1-201ENST00000468126 897 ntBASIC18.69■□□□□ 0.58
CCND1P24385 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.69■□□□□ 0.58
CCND1P24385 AL160286.2-201ENST00000567150 934 ntBASIC18.69■□□□□ 0.58
CCND1P24385 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.69■□□□□ 0.58
CCND1P24385 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.69■□□□□ 0.58
CCND1P24385 AL445675.2-201ENST00000620291 557 ntBASIC18.69■□□□□ 0.58
CCND1P24385 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCND1P24385 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CCND1P24385 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.69■□□□□ 0.58
CCND1P24385 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.69■□□□□ 0.58
CCND1P24385 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCND1P24385 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCND1P24385 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CCND1P24385 AC141586.3-201ENST00000562166 1838 ntBASIC18.69■□□□□ 0.58
CCND1P24385 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCND1P24385 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCND1P24385 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCND1P24385 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCND1P24385 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCND1P24385 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCND1P24385 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCND1P24385 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCND1P24385 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCND1P24385 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.68■□□□□ 0.58
CCND1P24385 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCND1P24385 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCND1P24385 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCND1P24385 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCND1P24385 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.68■□□□□ 0.58
CCND1P24385 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCND1P24385 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCND1P24385 KSR1P1-201ENST00000446298 240 ntBASIC18.68■□□□□ 0.58
CCND1P24385 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCND1P24385 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCND1P24385 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.68■□□□□ 0.58
CCND1P24385 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.68■□□□□ 0.58
CCND1P24385 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.68■□□□□ 0.58
CCND1P24385 TMEM191A-211ENST00000637163 1067 ntBASIC18.68■□□□□ 0.58
CCND1P24385 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CCND1P24385 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.68■□□□□ 0.58
CCND1P24385 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CCND1P24385 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CCND1P24385 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCND1P24385 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCND1P24385 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCND1P24385 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.68■□□□□ 0.58
CCND1P24385 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCND1P24385 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.68■□□□□ 0.58
CCND1P24385 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCND1P24385 AC084018.2-201ENST00000613093 2607 ntBASIC18.68■□□□□ 0.58
CCND1P24385 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCND1P24385 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.67■□□□□ 0.58
CCND1P24385 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.67■□□□□ 0.58
CCND1P24385 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.67■□□□□ 0.58
CCND1P24385 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms