Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCL1P22362 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCL1P22362 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCL1P22362 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCL1P22362 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16■□□□□ 0.15
CCL1P22362 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCL1P22362 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CCL1P22362 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16■□□□□ 0.15
CCL1P22362 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCL1P22362 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCL1P22362 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16■□□□□ 0.15
CCL1P22362 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16■□□□□ 0.15
CCL1P22362 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCL1P22362 UBE2SP1-201ENST00000450587 669 ntBASIC16■□□□□ 0.15
CCL1P22362 TSPY20P-201ENST00000450910 630 ntBASIC16■□□□□ 0.15
CCL1P22362 AC098590.1-201ENST00000468126 897 ntBASIC16■□□□□ 0.15
CCL1P22362 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCL1P22362 AC097488.1-201ENST00000507834 756 ntBASIC16■□□□□ 0.15
CCL1P22362 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16■□□□□ 0.15
CCL1P22362 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16■□□□□ 0.15
CCL1P22362 MIR3180-5-201ENST00000583743 153 ntBASIC16■□□□□ 0.15
CCL1P22362 AC233702.5-201ENST00000584107 538 ntBASIC16■□□□□ 0.15
CCL1P22362 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16■□□□□ 0.15
CCL1P22362 AC113410.3-201ENST00000623366 203 ntBASIC16■□□□□ 0.15
CCL1P22362 AC138028.4-201ENST00000564984 1845 ntBASIC16■□□□□ 0.15
CCL1P22362 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16■□□□□ 0.15
CCL1P22362 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCL1P22362 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCL1P22362 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CCL1P22362 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16■□□□□ 0.15
CCL1P22362 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CCL1P22362 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CCL1P22362 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCL1P22362 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCL1P22362 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.99■□□□□ 0.15
CCL1P22362 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCL1P22362 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.99■□□□□ 0.15
CCL1P22362 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.99■□□□□ 0.15
CCL1P22362 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.99■□□□□ 0.15
CCL1P22362 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCL1P22362 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15.99■□□□□ 0.15
CCL1P22362 GCSHP5-201ENST00000443090 522 ntBASIC15.99■□□□□ 0.15
CCL1P22362 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.99■□□□□ 0.15
CCL1P22362 AC142381.4-202ENST00000563973 229 ntBASIC15.99■□□□□ 0.15
CCL1P22362 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.99■□□□□ 0.15
CCL1P22362 REXO1L10P-201ENST00000615707 1290 ntBASIC15.99■□□□□ 0.15
CCL1P22362 REXO1L12P-201ENST00000622156 912 ntBASIC15.99■□□□□ 0.15
CCL1P22362 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCL1P22362 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCL1P22362 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.99■□□□□ 0.15
CCL1P22362 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.99■□□□□ 0.15
CCL1P22362 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.99■□□□□ 0.15
CCL1P22362 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.99■□□□□ 0.15
CCL1P22362 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.99■□□□□ 0.15
CCL1P22362 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCL1P22362 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCL1P22362 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCL1P22362 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCL1P22362 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCL1P22362 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.98■□□□□ 0.15
CCL1P22362 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCL1P22362 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.98■□□□□ 0.15
CCL1P22362 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CCL1P22362 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCL1P22362 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCL1P22362 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCL1P22362 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCL1P22362 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CCL1P22362 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.98■□□□□ 0.15
CCL1P22362 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.98■□□□□ 0.15
CCL1P22362 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCL1P22362 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CCL1P22362 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.98■□□□□ 0.15
CCL1P22362 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCL1P22362 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.98■□□□□ 0.15
CCL1P22362 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCL1P22362 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.98■□□□□ 0.15
CCL1P22362 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC15.98■□□□□ 0.15
CCL1P22362 AP005242.2-201ENST00000580065 1175 ntBASIC15.98■□□□□ 0.15
CCL1P22362 MIR4674-201ENST00000582457 87 ntBASIC15.98■□□□□ 0.15
CCL1P22362 AL049637.2-201ENST00000641778 930 ntBASIC15.98■□□□□ 0.15
CCL1P22362 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCL1P22362 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCL1P22362 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCL1P22362 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CCL1P22362 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CCL1P22362 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.98■□□□□ 0.15
CCL1P22362 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.98■□□□□ 0.15
CCL1P22362 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CCL1P22362 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCL1P22362 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.98■□□□□ 0.15
CCL1P22362 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.98■□□□□ 0.15
CCL1P22362 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.98■□□□□ 0.15
CCL1P22362 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCL1P22362 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
CCL1P22362 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.98■□□□□ 0.15
CCL1P22362 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCL1P22362 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.97■□□□□ 0.15
CCL1P22362 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCL1P22362 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms