Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ATF1P18846 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATF1P18846 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
ATF1P18846 HEIH-201ENST00000623091 1652 ntBASIC16.34■□□□□ 0.21
ATF1P18846 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ATF1P18846 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ATF1P18846 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ATF1P18846 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
ATF1P18846 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ATF1P18846 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ATF1P18846 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
ATF1P18846 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ATF1P18846 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATF1P18846 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
ATF1P18846 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
ATF1P18846 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATF1P18846 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATF1P18846 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.33■□□□□ 0.2
ATF1P18846 HLA-L-209ENST00000420110 1011 ntBASIC16.33■□□□□ 0.2
ATF1P18846 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.33■□□□□ 0.2
ATF1P18846 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.33■□□□□ 0.2
ATF1P18846 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.33■□□□□ 0.2
ATF1P18846 RNA5SP413-201ENST00000516373 109 ntBASIC16.33■□□□□ 0.2
ATF1P18846 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.33■□□□□ 0.2
ATF1P18846 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ATF1P18846 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATF1P18846 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATF1P18846 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.33■□□□□ 0.2
ATF1P18846 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATF1P18846 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATF1P18846 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ATF1P18846 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATF1P18846 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATF1P18846 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
ATF1P18846 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.33■□□□□ 0.2
ATF1P18846 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATF1P18846 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATF1P18846 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATF1P18846 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATF1P18846 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.32■□□□□ 0.2
ATF1P18846 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATF1P18846 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATF1P18846 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATF1P18846 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.32■□□□□ 0.2
ATF1P18846 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATF1P18846 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATF1P18846 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.32■□□□□ 0.2
ATF1P18846 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
ATF1P18846 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.32■□□□□ 0.2
ATF1P18846 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATF1P18846 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.32■□□□□ 0.2
ATF1P18846 AC026366.1-201ENST00000488803 879 ntBASIC16.32■□□□□ 0.2
ATF1P18846 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.32■□□□□ 0.2
ATF1P18846 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.32■□□□□ 0.2
ATF1P18846 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATF1P18846 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ATF1P18846 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.32■□□□□ 0.2
ATF1P18846 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
ATF1P18846 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.32■□□□□ 0.2
ATF1P18846 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATF1P18846 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.32■□□□□ 0.2
ATF1P18846 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATF1P18846 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ATF1P18846 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATF1P18846 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATF1P18846 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATF1P18846 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATF1P18846 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATF1P18846 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
ATF1P18846 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATF1P18846 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.31■□□□□ 0.2
ATF1P18846 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.31■□□□□ 0.2
ATF1P18846 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATF1P18846 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.31■□□□□ 0.2
ATF1P18846 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATF1P18846 AC099398.1-201ENST00000567919 2776 ntBASIC16.31■□□□□ 0.2
ATF1P18846 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.31■□□□□ 0.2
ATF1P18846 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATF1P18846 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATF1P18846 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATF1P18846 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATF1P18846 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATF1P18846 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATF1P18846 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.31■□□□□ 0.2
ATF1P18846 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATF1P18846 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.31■□□□□ 0.2
ATF1P18846 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.31■□□□□ 0.2
ATF1P18846 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATF1P18846 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.31■□□□□ 0.2
ATF1P18846 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.31■□□□□ 0.2
ATF1P18846 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATF1P18846 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.31■□□□□ 0.2
ATF1P18846 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATF1P18846 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATF1P18846 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATF1P18846 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ATF1P18846 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
ATF1P18846 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.31■□□□□ 0.2
ATF1P18846 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.31■□□□□ 0.2
ATF1P18846 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms