Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC2P18074 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.11■□□□□ 0.65
ERCC2P18074 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.11■□□□□ 0.65
ERCC2P18074 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC2P18074 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC2P18074 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.11■□□□□ 0.65
ERCC2P18074 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC2P18074 AP000593.1-201ENST00000393668 712 ntBASIC19.11■□□□□ 0.65
ERCC2P18074 AC009947.2-201ENST00000444014 672 ntBASIC19.11■□□□□ 0.65
ERCC2P18074 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.11■□□□□ 0.65
ERCC2P18074 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.11■□□□□ 0.65
ERCC2P18074 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC2P18074 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC2P18074 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC2P18074 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.11■□□□□ 0.65
ERCC2P18074 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC2P18074 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
ERCC2P18074 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
ERCC2P18074 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC2P18074 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC2P18074 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC2P18074 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
ERCC2P18074 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC2P18074 AC020763.4-201ENST00000623414 4170 ntBASIC19.11■□□□□ 0.65
ERCC2P18074 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.1■□□□□ 0.65
ERCC2P18074 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC2P18074 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC2P18074 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC2P18074 KRT8P7-201ENST00000533003 1432 ntBASIC19.1■□□□□ 0.65
ERCC2P18074 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
ERCC2P18074 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.1■□□□□ 0.65
ERCC2P18074 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC2P18074 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC2P18074 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC2P18074 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.1■□□□□ 0.65
ERCC2P18074 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.1■□□□□ 0.65
ERCC2P18074 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC2P18074 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
ERCC2P18074 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC2P18074 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ERCC2P18074 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC2P18074 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC2P18074 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC2P18074 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC2P18074 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC2P18074 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
ERCC2P18074 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.1■□□□□ 0.65
ERCC2P18074 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.1■□□□□ 0.65
ERCC2P18074 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC2P18074 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC2P18074 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.09■□□□□ 0.65
ERCC2P18074 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC2P18074 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC2P18074 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC2P18074 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC2P18074 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.09■□□□□ 0.65
ERCC2P18074 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC2P18074 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC2P18074 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC2P18074 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC2P18074 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.09■□□□□ 0.65
ERCC2P18074 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
ERCC2P18074 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC2P18074 ECEL1P3-201ENST00000427961 737 ntBASIC19.09■□□□□ 0.65
ERCC2P18074 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.09■□□□□ 0.65
ERCC2P18074 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.09■□□□□ 0.65
ERCC2P18074 AC010203.1-204ENST00000548782 407 ntBASIC19.09■□□□□ 0.65
ERCC2P18074 AC112497.1-201ENST00000624824 639 ntBASIC19.09■□□□□ 0.65
ERCC2P18074 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ERCC2P18074 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC2P18074 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
ERCC2P18074 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC2P18074 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ERCC2P18074 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC2P18074 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC2P18074 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC2P18074 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC2P18074 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ERCC2P18074 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.08■□□□□ 0.65
ERCC2P18074 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.08■□□□□ 0.65
ERCC2P18074 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.08■□□□□ 0.65
ERCC2P18074 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ERCC2P18074 AC138932.1-201ENST00000534164 6830 ntBASIC19.08■□□□□ 0.65
ERCC2P18074 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ERCC2P18074 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ERCC2P18074 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ERCC2P18074 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ERCC2P18074 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ERCC2P18074 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.65
ERCC2P18074 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.08■□□□□ 0.65
ERCC2P18074 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.08■□□□□ 0.65
ERCC2P18074 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC2P18074 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.08■□□□□ 0.64
ERCC2P18074 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC2P18074 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.08■□□□□ 0.64
ERCC2P18074 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
ERCC2P18074 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
ERCC2P18074 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC2P18074 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.08■□□□□ 0.64
ERCC2P18074 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms