Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRAFP15056 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BRAFP15056 AC073592.3-201ENST00000625118 1834 ntBASIC19.13■□□□□ 0.65
BRAFP15056 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
BRAFP15056 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BRAFP15056 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.13■□□□□ 0.65
BRAFP15056 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.13■□□□□ 0.65
BRAFP15056 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRAFP15056 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRAFP15056 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
BRAFP15056 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
BRAFP15056 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.13■□□□□ 0.65
BRAFP15056 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRAFP15056 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
BRAFP15056 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
BRAFP15056 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
BRAFP15056 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRAFP15056 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRAFP15056 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
BRAFP15056 AC126763.1-201ENST00000552015 2118 ntBASIC19.12■□□□□ 0.65
BRAFP15056 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRAFP15056 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRAFP15056 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.12■□□□□ 0.65
BRAFP15056 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
BRAFP15056 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BRAFP15056 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
BRAFP15056 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
BRAFP15056 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BRAFP15056 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BRAFP15056 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BRAFP15056 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.12■□□□□ 0.65
BRAFP15056 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
BRAFP15056 TUBB8P6-201ENST00000436895 1288 ntBASIC19.12■□□□□ 0.65
BRAFP15056 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.12■□□□□ 0.65
BRAFP15056 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.12■□□□□ 0.65
BRAFP15056 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRAFP15056 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.12■□□□□ 0.65
BRAFP15056 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
BRAFP15056 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.12■□□□□ 0.65
BRAFP15056 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
BRAFP15056 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRAFP15056 BCL2-203ENST00000589955 5011 ntBASIC19.12■□□□□ 0.65
BRAFP15056 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRAFP15056 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRAFP15056 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.11■□□□□ 0.65
BRAFP15056 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BRAFP15056 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.11■□□□□ 0.65
BRAFP15056 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRAFP15056 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRAFP15056 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRAFP15056 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.11■□□□□ 0.65
BRAFP15056 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BRAFP15056 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
BRAFP15056 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
BRAFP15056 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BRAFP15056 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.11■□□□□ 0.65
BRAFP15056 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRAFP15056 KRT8P8-201ENST00000434750 1448 ntBASIC19.11■□□□□ 0.65
BRAFP15056 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BRAFP15056 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRAFP15056 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRAFP15056 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRAFP15056 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.11■□□□□ 0.65
BRAFP15056 FAM197Y1-201ENST00000421178 764 ntBASIC19.11■□□□□ 0.65
BRAFP15056 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.11■□□□□ 0.65
BRAFP15056 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.11■□□□□ 0.65
BRAFP15056 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.11■□□□□ 0.65
BRAFP15056 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.11■□□□□ 0.65
BRAFP15056 AP002982.1-201ENST00000492365 877 ntBASIC19.11■□□□□ 0.65
BRAFP15056 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.11■□□□□ 0.65
BRAFP15056 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
BRAFP15056 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.11■□□□□ 0.65
BRAFP15056 CD177P1-201ENST00000606252 935 ntBASIC19.11■□□□□ 0.65
BRAFP15056 AC073195.1-201ENST00000607241 877 ntBASIC19.11■□□□□ 0.65
BRAFP15056 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRAFP15056 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRAFP15056 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRAFP15056 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BRAFP15056 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.11■□□□□ 0.65
BRAFP15056 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BRAFP15056 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
BRAFP15056 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
BRAFP15056 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BRAFP15056 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
BRAFP15056 NIFKP9-201ENST00000419265 221 ntBASIC19.1■□□□□ 0.65
BRAFP15056 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
BRAFP15056 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.1■□□□□ 0.65
BRAFP15056 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
BRAFP15056 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BRAFP15056 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BRAFP15056 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
BRAFP15056 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BRAFP15056 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BRAFP15056 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
BRAFP15056 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BRAFP15056 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRAFP15056 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRAFP15056 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BRAFP15056 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRAFP15056 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms