Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RARBP10826 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RARBP10826 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RARBP10826 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RARBP10826 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RARBP10826 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.78■□□□□ 0.92
RARBP10826 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RARBP10826 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RARBP10826 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RARBP10826 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RARBP10826 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.78■□□□□ 0.92
RARBP10826 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.78■□□□□ 0.92
RARBP10826 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RARBP10826 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RARBP10826 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.78■□□□□ 0.92
RARBP10826 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.78■□□□□ 0.92
RARBP10826 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RARBP10826 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RARBP10826 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.78■□□□□ 0.92
RARBP10826 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.78■□□□□ 0.92
RARBP10826 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.78■□□□□ 0.92
RARBP10826 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.78■□□□□ 0.92
RARBP10826 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
RARBP10826 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.78■□□□□ 0.92
RARBP10826 AC009065.1-201ENST00000564055 1225 ntBASIC20.78■□□□□ 0.92
RARBP10826 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RARBP10826 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RARBP10826 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.78■□□□□ 0.92
RARBP10826 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RARBP10826 FEM1AP3-201ENST00000403722 1741 ntBASIC20.78■□□□□ 0.92
RARBP10826 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.78■□□□□ 0.92
RARBP10826 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RARBP10826 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RARBP10826 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.77■□□□□ 0.92
RARBP10826 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RARBP10826 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RARBP10826 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
RARBP10826 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RARBP10826 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.77■□□□□ 0.92
RARBP10826 AL353692.3-201ENST00000407031 1396 ntBASIC20.77■□□□□ 0.92
RARBP10826 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RARBP10826 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.77■□□□□ 0.92
RARBP10826 MINOS1P3-201ENST00000457048 203 ntBASIC20.77■□□□□ 0.92
RARBP10826 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RARBP10826 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.77■□□□□ 0.92
RARBP10826 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RARBP10826 AP005901.3-202ENST00000581653 237 ntBASIC20.77■□□□□ 0.92
RARBP10826 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.77■□□□□ 0.92
RARBP10826 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.77■□□□□ 0.92
RARBP10826 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RARBP10826 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
RARBP10826 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.77■□□□□ 0.92
RARBP10826 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RARBP10826 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RARBP10826 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
RARBP10826 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.77■□□□□ 0.91
RARBP10826 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RARBP10826 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RARBP10826 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
RARBP10826 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RARBP10826 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RARBP10826 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RARBP10826 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RARBP10826 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RARBP10826 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RARBP10826 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RARBP10826 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
RARBP10826 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RARBP10826 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.76■□□□□ 0.91
RARBP10826 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.76■□□□□ 0.91
RARBP10826 AF238378.1-201ENST00000526806 358 ntBASIC20.76■□□□□ 0.91
RARBP10826 AC011840.4-201ENST00000578471 627 ntBASIC20.76■□□□□ 0.91
RARBP10826 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RARBP10826 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RARBP10826 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.76■□□□□ 0.91
RARBP10826 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.76■□□□□ 0.91
RARBP10826 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RARBP10826 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.76■□□□□ 0.91
RARBP10826 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RARBP10826 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RARBP10826 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RARBP10826 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RARBP10826 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RARBP10826 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.75■□□□□ 0.91
RARBP10826 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RARBP10826 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.75■□□□□ 0.91
RARBP10826 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RARBP10826 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RARBP10826 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RARBP10826 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RARBP10826 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RARBP10826 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.75■□□□□ 0.91
RARBP10826 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.75■□□□□ 0.91
RARBP10826 AP001005.1-201ENST00000571755 1248 ntBASIC20.75■□□□□ 0.91
RARBP10826 AL671883.3-201ENST00000603274 991 ntBASIC20.75■□□□□ 0.91
RARBP10826 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.75■□□□□ 0.91
RARBP10826 AC117500.6-201ENST00000624871 588 ntBASIC20.75■□□□□ 0.91
RARBP10826 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.75■□□□□ 0.91
RARBP10826 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RARBP10826 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms