Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC1P07992 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC1P07992 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC1P07992 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC1P07992 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC1P07992 AC009113.1-201ENST00000570267 2443 ntBASIC16.49■□□□□ 0.23
ERCC1P07992 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC1P07992 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC1P07992 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC1P07992 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC1P07992 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC1P07992 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC1P07992 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC1P07992 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
ERCC1P07992 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC1P07992 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
ERCC1P07992 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.49■□□□□ 0.23
ERCC1P07992 AC004951.3-201ENST00000418645 1148 ntBASIC16.49■□□□□ 0.23
ERCC1P07992 AC004980.1-204ENST00000429707 299 ntBASIC16.49■□□□□ 0.23
ERCC1P07992 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC1P07992 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.49■□□□□ 0.23
ERCC1P07992 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.49■□□□□ 0.23
ERCC1P07992 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.49■□□□□ 0.23
ERCC1P07992 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.49■□□□□ 0.23
ERCC1P07992 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC1P07992 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC1P07992 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC1P07992 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ERCC1P07992 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC1P07992 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC1P07992 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ERCC1P07992 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC1P07992 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.49■□□□□ 0.23
ERCC1P07992 AC135050.7-201ENST00000624508 2218 ntBASIC16.49■□□□□ 0.23
ERCC1P07992 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.49■□□□□ 0.23
ERCC1P07992 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC1P07992 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ERCC1P07992 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.48■□□□□ 0.23
ERCC1P07992 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC1P07992 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC1P07992 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ERCC1P07992 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.48■□□□□ 0.23
ERCC1P07992 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.48■□□□□ 0.23
ERCC1P07992 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.48■□□□□ 0.23
ERCC1P07992 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC1P07992 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC1P07992 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC1P07992 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.48■□□□□ 0.23
ERCC1P07992 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.48■□□□□ 0.23
ERCC1P07992 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC1P07992 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC1P07992 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.48■□□□□ 0.23
ERCC1P07992 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
ERCC1P07992 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC1P07992 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
ERCC1P07992 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.48■□□□□ 0.23
ERCC1P07992 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.48■□□□□ 0.23
ERCC1P07992 B3GAT3P1-201ENST00000471720 806 ntBASIC16.48■□□□□ 0.23
ERCC1P07992 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC1P07992 AC128688.1-201ENST00000487626 519 ntBASIC16.48■□□□□ 0.23
ERCC1P07992 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC1P07992 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.48■□□□□ 0.23
ERCC1P07992 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.48■□□□□ 0.23
ERCC1P07992 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.48■□□□□ 0.23
ERCC1P07992 AC145285.6-201ENST00000604632 637 ntBASIC16.48■□□□□ 0.23
ERCC1P07992 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
ERCC1P07992 AC005363.2-201ENST00000618631 242 ntBASIC16.48■□□□□ 0.23
ERCC1P07992 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.48■□□□□ 0.23
ERCC1P07992 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.48■□□□□ 0.23
ERCC1P07992 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
ERCC1P07992 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC1P07992 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC1P07992 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ERCC1P07992 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC1P07992 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC1P07992 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC1P07992 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC1P07992 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC1P07992 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC1P07992 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC1P07992 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC1P07992 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.48■□□□□ 0.23
ERCC1P07992 LINC01568-207ENST00000641790 1380 ntBASIC16.48■□□□□ 0.23
ERCC1P07992 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.48■□□□□ 0.23
ERCC1P07992 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
ERCC1P07992 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC1P07992 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC1P07992 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC1P07992 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC1P07992 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ERCC1P07992 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ERCC1P07992 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.48■□□□□ 0.23
ERCC1P07992 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ERCC1P07992 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC1P07992 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC1P07992 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC1P07992 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
ERCC1P07992 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
ERCC1P07992 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
ERCC1P07992 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms