Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.38■□□□□ 0.37
OPN1SWP03999 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
OPN1SWP03999 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.38■□□□□ 0.37
OPN1SWP03999 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
OPN1SWP03999 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.38■□□□□ 0.37
OPN1SWP03999 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
OPN1SWP03999 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
OPN1SWP03999 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
OPN1SWP03999 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
OPN1SWP03999 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
OPN1SWP03999 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
OPN1SWP03999 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
OPN1SWP03999 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.38■□□□□ 0.37
OPN1SWP03999 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.38■□□□□ 0.37
OPN1SWP03999 KRT18P6-201ENST00000555540 1265 ntBASIC17.38■□□□□ 0.37
OPN1SWP03999 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
OPN1SWP03999 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.38■□□□□ 0.37
OPN1SWP03999 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.38■□□□□ 0.37
OPN1SWP03999 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.38■□□□□ 0.37
OPN1SWP03999 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.38■□□□□ 0.37
OPN1SWP03999 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
OPN1SWP03999 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
OPN1SWP03999 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
OPN1SWP03999 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
OPN1SWP03999 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
OPN1SWP03999 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
OPN1SWP03999 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
OPN1SWP03999 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
OPN1SWP03999 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
OPN1SWP03999 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
OPN1SWP03999 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
OPN1SWP03999 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
OPN1SWP03999 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
OPN1SWP03999 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
OPN1SWP03999 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.37■□□□□ 0.37
OPN1SWP03999 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
OPN1SWP03999 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
OPN1SWP03999 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
OPN1SWP03999 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.37■□□□□ 0.37
OPN1SWP03999 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.37■□□□□ 0.37
OPN1SWP03999 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
OPN1SWP03999 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
OPN1SWP03999 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
OPN1SWP03999 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
OPN1SWP03999 AP002982.1-201ENST00000492365 877 ntBASIC17.37■□□□□ 0.37
OPN1SWP03999 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.37■□□□□ 0.37
OPN1SWP03999 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
OPN1SWP03999 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.37■□□□□ 0.37
OPN1SWP03999 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
OPN1SWP03999 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
OPN1SWP03999 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
OPN1SWP03999 AC073648.6-201ENST00000641589 218 ntBASIC17.37■□□□□ 0.37
OPN1SWP03999 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
OPN1SWP03999 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.37■□□□□ 0.37
OPN1SWP03999 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
OPN1SWP03999 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
OPN1SWP03999 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
OPN1SWP03999 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
OPN1SWP03999 HTR7P1-201ENST00000538670 1336 ntBASIC17.37■□□□□ 0.37
OPN1SWP03999 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
OPN1SWP03999 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
OPN1SWP03999 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.37■□□□□ 0.37
OPN1SWP03999 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
OPN1SWP03999 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
OPN1SWP03999 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.37■□□□□ 0.37
OPN1SWP03999 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.37■□□□□ 0.37
OPN1SWP03999 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
OPN1SWP03999 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.36■□□□□ 0.37
OPN1SWP03999 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
OPN1SWP03999 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
OPN1SWP03999 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
OPN1SWP03999 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
OPN1SWP03999 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.36■□□□□ 0.37
OPN1SWP03999 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.36■□□□□ 0.37
OPN1SWP03999 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
OPN1SWP03999 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
OPN1SWP03999 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
OPN1SWP03999 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
OPN1SWP03999 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
OPN1SWP03999 AC133681.1-201ENST00000465482 601 ntBASIC17.36■□□□□ 0.37
OPN1SWP03999 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
OPN1SWP03999 RN7SL471P-201ENST00000580476 299 ntBASIC17.36■□□□□ 0.37
OPN1SWP03999 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.36■□□□□ 0.37
OPN1SWP03999 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
OPN1SWP03999 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.36■□□□□ 0.37
OPN1SWP03999 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
OPN1SWP03999 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
OPN1SWP03999 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
OPN1SWP03999 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.36■□□□□ 0.37
OPN1SWP03999 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.36■□□□□ 0.37
OPN1SWP03999 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
OPN1SWP03999 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.36■□□□□ 0.37
OPN1SWP03999 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
OPN1SWP03999 RCC2P3-201ENST00000418112 1537 ntBASIC17.36■□□□□ 0.37
OPN1SWP03999 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.36■□□□□ 0.37
OPN1SWP03999 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
OPN1SWP03999 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
OPN1SWP03999 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
OPN1SWP03999 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
OPN1SWP03999 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms