Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA2P01906 FAM197Y4-202ENST00000622692 608 ntBASIC16.72■□□□□ 0.27
HLA-DQA2P01906 CR392000.1-201ENST00000624770 1228 ntBASIC16.72■□□□□ 0.27
HLA-DQA2P01906 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA2P01906 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA2P01906 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
HLA-DQA2P01906 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
HLA-DQA2P01906 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA2P01906 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.72■□□□□ 0.27
HLA-DQA2P01906 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
HLA-DQA2P01906 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.72■□□□□ 0.27
HLA-DQA2P01906 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
HLA-DQA2P01906 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA2P01906 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA2P01906 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
HLA-DQA2P01906 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA2P01906 HEIH-201ENST00000623091 1652 ntBASIC16.72■□□□□ 0.27
HLA-DQA2P01906 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA2P01906 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA2P01906 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA2P01906 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.72■□□□□ 0.27
HLA-DQA2P01906 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
HLA-DQA2P01906 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQA2P01906 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQA2P01906 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQA2P01906 AL390961.4-201ENST00000623958 2535 ntBASIC16.71■□□□□ 0.27
HLA-DQA2P01906 KRT16P1-201ENST00000399124 1418 ntBASIC16.71■□□□□ 0.27
HLA-DQA2P01906 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.71■□□□□ 0.27
HLA-DQA2P01906 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.71■□□□□ 0.27
HLA-DQA2P01906 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
HLA-DQA2P01906 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
HLA-DQA2P01906 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQA2P01906 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.71■□□□□ 0.27
HLA-DQA2P01906 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQA2P01906 POU5F1P3-201ENST00000428824 1078 ntBASIC16.71■□□□□ 0.27
HLA-DQA2P01906 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQA2P01906 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.71■□□□□ 0.27
HLA-DQA2P01906 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.71■□□□□ 0.27
HLA-DQA2P01906 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.71■□□□□ 0.27
HLA-DQA2P01906 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQA2P01906 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQA2P01906 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
HLA-DQA2P01906 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQA2P01906 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQA2P01906 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
HLA-DQA2P01906 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
HLA-DQA2P01906 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
HLA-DQA2P01906 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
HLA-DQA2P01906 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
HLA-DQA2P01906 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.7■□□□□ 0.26
HLA-DQA2P01906 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
HLA-DQA2P01906 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
HLA-DQA2P01906 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HLA-DQA2P01906 AC126763.1-201ENST00000552015 2118 ntBASIC16.7■□□□□ 0.26
HLA-DQA2P01906 AC135050.7-201ENST00000624508 2218 ntBASIC16.7■□□□□ 0.26
HLA-DQA2P01906 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.7■□□□□ 0.26
HLA-DQA2P01906 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQA2P01906 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
HLA-DQA2P01906 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQA2P01906 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.7■□□□□ 0.26
HLA-DQA2P01906 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQA2P01906 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.7■□□□□ 0.26
HLA-DQA2P01906 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQA2P01906 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQA2P01906 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQA2P01906 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.7■□□□□ 0.26
HLA-DQA2P01906 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.7■□□□□ 0.26
HLA-DQA2P01906 AC004951.3-201ENST00000418645 1148 ntBASIC16.7■□□□□ 0.26
HLA-DQA2P01906 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.7■□□□□ 0.26
HLA-DQA2P01906 MIR4651-201ENST00000582622 73 ntBASIC16.7■□□□□ 0.26
HLA-DQA2P01906 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQA2P01906 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQA2P01906 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.7■□□□□ 0.26
HLA-DQA2P01906 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQA2P01906 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQA2P01906 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQA2P01906 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQA2P01906 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.7■□□□□ 0.26
HLA-DQA2P01906 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQA2P01906 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQA2P01906 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
HLA-DQA2P01906 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.69■□□□□ 0.26
HLA-DQA2P01906 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQA2P01906 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQA2P01906 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HLA-DQA2P01906 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.69■□□□□ 0.26
HLA-DQA2P01906 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQA2P01906 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
HLA-DQA2P01906 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
HLA-DQA2P01906 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQA2P01906 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.69■□□□□ 0.26
HLA-DQA2P01906 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQA2P01906 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQA2P01906 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQA2P01906 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQA2P01906 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQA2P01906 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQA2P01906 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.69■□□□□ 0.26
HLA-DQA2P01906 FAM201B-201ENST00000458407 597 ntBASIC16.69■□□□□ 0.26
HLA-DQA2P01906 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms