Protein–RNA interactions for Protein: O95460

MATN4, Matrilin-4, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATN4O95460 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MATN4O95460 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MATN4O95460 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MATN4O95460 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MATN4O95460 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MATN4O95460 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MATN4O95460 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MATN4O95460 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.31■□□□□ 0.52
MATN4O95460 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MATN4O95460 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MATN4O95460 AC008556.1-201ENST00000610908 2040 ntBASIC18.31■□□□□ 0.52
MATN4O95460 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MATN4O95460 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MATN4O95460 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MATN4O95460 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
MATN4O95460 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
MATN4O95460 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MATN4O95460 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MATN4O95460 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MATN4O95460 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MATN4O95460 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MATN4O95460 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.3■□□□□ 0.52
MATN4O95460 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.3■□□□□ 0.52
MATN4O95460 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MATN4O95460 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MATN4O95460 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
MATN4O95460 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
MATN4O95460 INGX-201ENST00000359239 846 ntBASIC18.3■□□□□ 0.52
MATN4O95460 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.3■□□□□ 0.52
MATN4O95460 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MATN4O95460 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
MATN4O95460 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.3■□□□□ 0.52
MATN4O95460 MCCD1P1-208ENST00000445732 328 ntBASIC18.3■□□□□ 0.52
MATN4O95460 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.3■□□□□ 0.52
MATN4O95460 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.3■□□□□ 0.52
MATN4O95460 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.3■□□□□ 0.52
MATN4O95460 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.3■□□□□ 0.52
MATN4O95460 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.3■□□□□ 0.52
MATN4O95460 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MATN4O95460 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.3■□□□□ 0.52
MATN4O95460 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MATN4O95460 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.3■□□□□ 0.52
MATN4O95460 AL357033.4-201ENST00000617703 1807 ntBASIC18.3■□□□□ 0.52
MATN4O95460 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.3■□□□□ 0.52
MATN4O95460 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MATN4O95460 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MATN4O95460 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MATN4O95460 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
MATN4O95460 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MATN4O95460 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.29■□□□□ 0.52
MATN4O95460 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
MATN4O95460 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.29■□□□□ 0.52
MATN4O95460 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.29■□□□□ 0.52
MATN4O95460 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
MATN4O95460 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.29■□□□□ 0.52
MATN4O95460 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MATN4O95460 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
MATN4O95460 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.29■□□□□ 0.52
MATN4O95460 AC087499.1-201ENST00000418141 1075 ntBASIC18.29■□□□□ 0.52
MATN4O95460 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MATN4O95460 AC128688.1-201ENST00000487626 519 ntBASIC18.29■□□□□ 0.52
MATN4O95460 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
MATN4O95460 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.29■□□□□ 0.52
MATN4O95460 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.29■□□□□ 0.52
MATN4O95460 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
MATN4O95460 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
MATN4O95460 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
MATN4O95460 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
MATN4O95460 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
MATN4O95460 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.29■□□□□ 0.52
MATN4O95460 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MATN4O95460 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MATN4O95460 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MATN4O95460 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.29■□□□□ 0.52
MATN4O95460 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
MATN4O95460 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.29■□□□□ 0.52
MATN4O95460 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.29■□□□□ 0.52
MATN4O95460 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MATN4O95460 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MATN4O95460 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MATN4O95460 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MATN4O95460 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
MATN4O95460 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MATN4O95460 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.28■□□□□ 0.52
MATN4O95460 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
MATN4O95460 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
MATN4O95460 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MATN4O95460 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MATN4O95460 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.28■□□□□ 0.52
MATN4O95460 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.28■□□□□ 0.52
MATN4O95460 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
MATN4O95460 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.28■□□□□ 0.52
MATN4O95460 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.28■□□□□ 0.52
MATN4O95460 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MATN4O95460 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MATN4O95460 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.28■□□□□ 0.52
MATN4O95460 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
MATN4O95460 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MATN4O95460 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MATN4O95460 HCG11-201ENST00000411553 5696 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms