Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC27.79■■■□□ 2.04
RAPGEF3O95398 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.04
RAPGEF3O95398 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
RAPGEF3O95398 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC27.79■■■□□ 2.04
RAPGEF3O95398 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC27.79■■■□□ 2.04
RAPGEF3O95398 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
RAPGEF3O95398 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
RAPGEF3O95398 AC099778.1-201ENST00000568593 1911 ntBASIC27.79■■■□□ 2.04
RAPGEF3O95398 AL356309.3-201ENST00000624132 1934 ntBASIC27.79■■■□□ 2.04
RAPGEF3O95398 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
RAPGEF3O95398 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
RAPGEF3O95398 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
RAPGEF3O95398 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
RAPGEF3O95398 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC27.78■■■□□ 2.04
RAPGEF3O95398 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
RAPGEF3O95398 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
RAPGEF3O95398 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC27.78■■■□□ 2.04
RAPGEF3O95398 FUOM-202ENST00000368551 628 ntTSL 3 BASIC27.78■■■□□ 2.04
RAPGEF3O95398 ABCD1P5-201ENST00000445663 754 ntBASIC27.78■■■□□ 2.04
RAPGEF3O95398 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC27.78■■■□□ 2.04
RAPGEF3O95398 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC27.78■■■□□ 2.04
RAPGEF3O95398 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC27.78■■■□□ 2.04
RAPGEF3O95398 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC27.78■■■□□ 2.04
RAPGEF3O95398 MTDHP5-201ENST00000598980 586 ntBASIC27.78■■■□□ 2.04
RAPGEF3O95398 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC27.78■■■□□ 2.04
RAPGEF3O95398 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC27.78■■■□□ 2.04
RAPGEF3O95398 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
RAPGEF3O95398 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
RAPGEF3O95398 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
RAPGEF3O95398 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC27.78■■■□□ 2.04
RAPGEF3O95398 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
RAPGEF3O95398 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC27.77■■■□□ 2.04
RAPGEF3O95398 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
RAPGEF3O95398 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
RAPGEF3O95398 AL035633.1-201ENST00000406139 838 ntBASIC27.77■■■□□ 2.04
RAPGEF3O95398 FAM8A3P-201ENST00000427218 844 ntBASIC27.77■■■□□ 2.04
RAPGEF3O95398 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC27.77■■■□□ 2.04
RAPGEF3O95398 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC27.77■■■□□ 2.04
RAPGEF3O95398 AC009947.1-201ENST00000444350 727 ntBASIC27.77■■■□□ 2.04
RAPGEF3O95398 AC068472.1-201ENST00000474589 881 ntBASIC27.77■■■□□ 2.04
RAPGEF3O95398 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
RAPGEF3O95398 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC27.77■■■□□ 2.04
RAPGEF3O95398 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC27.77■■■□□ 2.04
RAPGEF3O95398 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC27.77■■■□□ 2.04
RAPGEF3O95398 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC27.77■■■□□ 2.04
RAPGEF3O95398 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC27.77■■■□□ 2.04
RAPGEF3O95398 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC27.77■■■□□ 2.04
RAPGEF3O95398 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC27.77■■■□□ 2.04
RAPGEF3O95398 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
RAPGEF3O95398 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
RAPGEF3O95398 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
RAPGEF3O95398 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
RAPGEF3O95398 CRCP-205ENST00000431089 942 ntTSL 2 BASIC27.76■■■□□ 2.03
RAPGEF3O95398 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC27.76■■■□□ 2.03
RAPGEF3O95398 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC27.76■■■□□ 2.03
RAPGEF3O95398 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC27.76■■■□□ 2.03
RAPGEF3O95398 AC105339.3-201ENST00000560043 636 ntBASIC27.76■■■□□ 2.03
RAPGEF3O95398 AC011467.2-201ENST00000598425 242 ntBASIC27.76■■■□□ 2.03
RAPGEF3O95398 AL138831.2-201ENST00000606564 490 ntBASIC27.76■■■□□ 2.03
RAPGEF3O95398 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC27.76■■■□□ 2.03
RAPGEF3O95398 ANKRD20A8P-203ENST00000641373 517 ntBASIC27.76■■■□□ 2.03
RAPGEF3O95398 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
RAPGEF3O95398 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
RAPGEF3O95398 KRT8P50-201ENST00000562022 1438 ntBASIC27.75■■■□□ 2.03
RAPGEF3O95398 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
RAPGEF3O95398 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
RAPGEF3O95398 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC27.75■■■□□ 2.03
RAPGEF3O95398 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC27.75■■■□□ 2.03
RAPGEF3O95398 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
RAPGEF3O95398 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC27.75■■■□□ 2.03
RAPGEF3O95398 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC27.75■■■□□ 2.03
RAPGEF3O95398 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC27.75■■■□□ 2.03
RAPGEF3O95398 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
RAPGEF3O95398 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
RAPGEF3O95398 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC27.74■■■□□ 2.03
RAPGEF3O95398 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC27.74■■■□□ 2.03
RAPGEF3O95398 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC27.74■■■□□ 2.03
RAPGEF3O95398 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
RAPGEF3O95398 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
RAPGEF3O95398 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
RAPGEF3O95398 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
RAPGEF3O95398 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC27.74■■■□□ 2.03
RAPGEF3O95398 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
RAPGEF3O95398 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC27.74■■■□□ 2.03
RAPGEF3O95398 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC27.74■■■□□ 2.03
RAPGEF3O95398 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC27.74■■■□□ 2.03
RAPGEF3O95398 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
RAPGEF3O95398 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
RAPGEF3O95398 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC27.74■■■□□ 2.03
RAPGEF3O95398 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC27.74■■■□□ 2.03
RAPGEF3O95398 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
RAPGEF3O95398 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
RAPGEF3O95398 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
RAPGEF3O95398 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC27.73■■■□□ 2.03
RAPGEF3O95398 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
RAPGEF3O95398 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC27.73■■■□□ 2.03
RAPGEF3O95398 INIP-202ENST00000374236 874 ntTSL 2 BASIC27.73■■■□□ 2.03
RAPGEF3O95398 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC27.73■■■□□ 2.03
RAPGEF3O95398 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC27.73■■■□□ 2.03
RAPGEF3O95398 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC27.73■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms